RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 HSD17B14Q9BPX1 270 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 SRSF8Q9BRL6 282 aaKnown RBP5.12□□□□□ -1.59
VPS41-209ENST00000457055 MYL10Q9BUA6 226 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 FICDQ9BVA6 458 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 MRPL13Q9BYD1 178 aaKnown RBP5.12□□□□□ -1.59
VPS41-209ENST00000457055 TM6SF2Q9BZW4 377 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 SLITRK2Q9H156 845 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 CHST8Q9H2A9 424 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 DPEP2Q9H4A9 486 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 NOL11Q9H8H0 719 aaKnown RBP5.12□□□□□ -1.59
VPS41-209ENST00000457055 VIPAS39Q9H9C1 493 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 VAT1LQ9HCJ6 419 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 ZFP14Q9HCL3 533 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 HEYLQ9NQ87 328 aaPredicted RBP5.12□□□□□ -1.59
VPS41-209ENST00000457055 PDGFCQ9NRA1 345 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 POT1Q9NUX5 634 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 GIN1Q9NXP7 522 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 WSB2Q9NYS7 404 aaPredicted RBP5.12□□□□□ -1.59
VPS41-209ENST00000457055 GTSE1Q9NYZ3 720 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 ADAM22Q9P0K1 906 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 SLC17A7Q9P2U7 560 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 ONECUT1Q9UBC0 465 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 SEC14L3Q9UDX4 400 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 PACSIN3Q9UKS6 424 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 UBE2J1Q9Y385 318 aaPredicted RBP5.12□□□□□ -1.59
VPS41-209ENST00000457055 PCDHA13Q9Y5I0 950 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 TNFRSF18Q9Y5U5 241 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 ZNF541Q9H0D2 1346 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 EIF3AQ14152 1382 aaKnown RBP5.12□□□□□ -1.59
VPS41-209ENST00000457055 THSD7BQ9C0I4 1608 aa5.12□□□□□ -1.59
VPS41-209ENST00000457055 PCSK5Q92824 1860 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 A0A1W2PPQ1 181 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CLEC18AA5D8T8 446 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 DPPA5A6NC42 116 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 GAGE10A6NGK3 116 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 FBLL1A6NHQ2 334 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 A8MUA0 341 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CCSO14618 274 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 NME2P1O60361 137 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 GLCEO94923 617 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 NXPH2O95156 264 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CFIP05156 583 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 LINC00614P0C842 121 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CTSAP10619 480 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 HSPD1P10809 573 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 PNMTP11086 282 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 SLC2A1P11166 492 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 MYL6BP14649 208 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 UGT1A6P19224 532 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 PPP2R1BP30154 601 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CHI3L1P36222 383 aaPredicted RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 TALDO1P37837 337 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 GRIA1P42261 906 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 PTDSS1P48651 473 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 HCAR3P49019 387 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 MAGOHP61326 146 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 UFM1P61960 85 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 ZNF45Q02386 682 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 TLE1Q04724 770 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 FOXM1Q08050 763 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 SIGLEC14Q08ET2 396 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 SLC13A2Q13183 592 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 PDE7AQ13946 482 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CSHL1Q14406 222 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 SLC17A1Q14916 467 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 GUK1Q16774 197 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 C5orf64Q2M2E5 130 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 ALKBH6Q3KRA9 238 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 ZNF766Q5HY98 468 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 SPOUT1Q5T280 376 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 ZNF618Q5T7W0 954 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 NADSYN1Q6IA69 706 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 ZFP1Q6P2D0 407 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 VWA1Q6PCB0 445 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 FIGLAQ6QHK4 219 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CLEC18BQ6UXF7 455 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CERS6Q6ZMG9 384 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 C11orf57Q6ZUT1 292 aaPredicted RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 PATL1Q86TB9 770 aaKnown RBP5.11□□□□□ -1.59
VPS41-209ENST00000457055 IFT20Q8IY31 132 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 SLC35F3Q8IY50 421 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 RBFAQ8N0V3 343 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 ABRAQ8N0Z2 381 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 MMP21Q8N119 569 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 STK40Q8N2I9 435 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 RNF148Q8N7C7 305 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CLEC18CQ8NCF0 446 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 DNAAF1Q8NEP3 725 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 OR10J5Q8NHC4 309 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 TBC1D15Q8TC07 691 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 AP3S1Q92572 193 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 FCGR1BQ92637 280 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 VOPP1Q96AW1 172 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 TAMM41Q96BW9 452 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 NPY6RQ99463 290 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 C12orf57Q99622 126 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 OMDQ99983 421 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 TMEM47Q9BQJ4 181 aa5.11□□□□□ -1.59
VPS41-209ENST00000457055 CPPED1Q9BRF8 314 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms