RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 IFNA7P01567 189 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 HRGP04196 525 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 TP53P04637 393 aaPredicted RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ACLYP53396 1101 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 DSTNP60981 165 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ZNF630Q2M218 657 aaPredicted RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 GARNL3Q5VVW2 1013 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 KIAA1161Q6NSJ0 714 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 DUSP18Q8NEJ0 188 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ASB11Q8WXH4 323 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 NLNQ9BYT8 704 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 CHIAQ9BZP6 476 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 SERHL2Q9H4I8 314 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 THSD1Q9NS62 852 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 VCANP13611 3396 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ANXA3P12429 323 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 SRP9P49458 86 aaKnown RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 EVX1P49640 407 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 VSX2P58304 361 aaPredicted RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 WDR5P61964 334 aaKnown RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 SNRPGP62308 76 aaKnown RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 GPR176Q14439 515 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 GGTA1PQ4G0N0 100 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 MPPE1Q53F39 396 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 LIX1LQ8IVB5 337 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 OR7G3Q8NG95 312 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 AP2M1Q96CW1 435 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ZFP3Q96NJ6 502 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 RBCK1Q9BYM8 510 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 PIGUQ9H490 435 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 REEP4Q9H6H4 257 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 RANBP3Q9H6Z4 567 aaPredicted RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 FOLH1BQ9HBA9 442 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 KLHL1Q9NR64 748 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ZDHHC3Q9NYG2 299 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 TAS2R7Q9NYW3 318 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 SEC14L3Q9UDX4 400 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 E9PQ18 207 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 TEX46H3BTG2 121 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 FFAR1O14842 300 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 STC2O76061 302 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 KLK1P06870 262 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 CSKP41240 450 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 CSNK1DP48730 415 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 PFN3P60673 137 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ILKQ13418 452 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 NTRK2Q16620 822 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 GPR33Q49SQ1 333 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 MTFR2Q6P444 385 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 ESX1Q8N693 406 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 CHTF18Q8WVB6 975 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 PPP1R3EQ9H7J1 279 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 C1GALT1Q9NS00 363 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 LHX3Q9UBR4 397 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 MGAT4BQ9UQ53 548 aa11.22□□□□□ -0.61
TRAK1-206ENST00000449246 EXO1Q9UQ84 846 aaKnown RBP11.22□□□□□ -0.61
TRAK1-206ENST00000449246 SEPT4O43236 478 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 CHP2O43745 196 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 LGI1O95970 557 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 RAF1P04049 648 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 CPEP16870 476 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 DNASE1P24855 282 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 TIA1P31483 386 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 CD79BP40259 229 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 DGKGP49619 791 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 MLLT1Q03111 559 aaPredicted RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 PUM1Q14671 1186 aaKnown RBP eCLIP11.21□□□□□ -0.614e-7■■□□□ 11.8
TRAK1-206ENST00000449246 ZNF791Q3KP31 576 aaPredicted RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 SYT14P1Q58G82 188 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 REEP3Q6NUK4 255 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 ACSM5Q6NUN0 579 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 METTL2BQ6P1Q9 378 aaKnown RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 RRM2BQ7LG56 351 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 SAMD12Q8N8I0 201 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 TMEM163Q8TC26 289 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 KIAA1143Q96AT1 154 aaPredicted RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 C12orf66Q96MD2 445 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 TEFMQ96QE5 360 aaKnown RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 AIFM2Q9BRQ8 373 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 THAP7Q9BT49 309 aaPredicted RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 FNDC11Q9BVV2 318 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 CHST8Q9H2A9 424 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 C12orf10Q9HB07 376 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 ZFR2Q9UPR6 939 aaKnown RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 CDH10Q9Y6N8 788 aa11.21□□□□□ -0.61
TRAK1-206ENST00000449246 COL4A4P53420 1690 aaPredicted RBP11.21□□□□□ -0.61
TRAK1-206ENST00000449246 NPIPB15A6NHN6 443 aaPredicted RBP11.21□□□□□ -0.62
TRAK1-206ENST00000449246 ACADMP11310 421 aa11.21□□□□□ -0.62
TRAK1-206ENST00000449246 CXCL3P19876 107 aa11.21□□□□□ -0.62
TRAK1-206ENST00000449246 NNMTP40261 264 aa11.21□□□□□ -0.62
TRAK1-206ENST00000449246 AGFG1P52594 562 aaKnown RBP11.21□□□□□ -0.62
TRAK1-206ENST00000449246 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.62
TRAK1-206ENST00000449246 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.62
TRAK1-206ENST00000449246 CCSMST1Q4G0I0 132 aa11.21□□□□□ -0.62
TRAK1-206ENST00000449246 HECTD3Q5T447 861 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms