RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ZNF793Q6ZN11 406 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 NUP54Q7Z3B4 507 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 GOLGA7Q7Z5G4 137 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 CTAGE6Q86UF2 777 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 SHISA5Q8N114 240 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 FAM13CQ8NE31 585 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 C17orf47Q8NEP4 570 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 MTBPQ96DY7 904 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ZNF597Q96LX8 424 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 FRG2BQ96QU4 278 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 MTERF1Q99551 399 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 MRPL57Q9BQC6 102 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 FUT8Q9BYC5 575 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ACSS3Q9H6R3 686 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 BRF2Q9HAW0 419 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 HHATLQ9HCP6 504 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ZNF180Q9UJW8 692 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 RNF6Q9Y252 685 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ATG4BQ9Y4P1 393 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ASB4Q9Y574 426 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 CLDN16Q9Y5I7 305 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ZNF780BQ9Y6R6 833 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 CREBBPQ92793 2442 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 A0A087WUV0 522 aaPredicted RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 ATP6AP2A0A1C7CYW4 349 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 C1orf226A1L170 272 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 TGFBR3LH3BV60 316 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 FGF17O60258 216 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ATP6AP2O75787 350 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 FAM155BO75949 473 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 TBX6O95947 436 aaPredicted RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 KRT6AP02538 564 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 KRT6BP04259 564 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 IGKV3-11P04433 115 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 SNRPAP09012 282 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 HSD3B1P14060 373 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 PRF1P14222 555 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 CD1EP15812 388 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 PORP16435 677 aaPredicted RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 CSNK2A2P19784 350 aaPredicted RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 HSD3B2P26439 372 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 RFC3P40938 356 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 GSTM5P46439 218 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 KRT6CP48668 564 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ST13P50502 369 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 MRPS22P82650 360 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 GTF3C1Q12789 2109 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 DLG1Q12959 904 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 NTRK2Q16620 822 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 GGTA1PQ4G0N0 100 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 FBXO48Q5FWF7 155 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 ZDHHC24Q6UX98 284 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 CHERPQ8IWX8 916 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 OR4N5Q8IXE1 308 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 GALNT12Q8IXK2 581 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 MMGT1Q8N4V1 131 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 SLC44A1Q8WWI5 657 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 PPWD1Q96BP3 646 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 HSPBAP1Q96EW2 488 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 GAL3ST4Q96RP7 486 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 TREX2Q9BQ50 279 aaPredicted RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 TTYH2Q9BSA4 534 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 DOHHQ9BU89 302 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 TRIM8Q9BZR9 551 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 WWTR1Q9GZV5 400 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 NOL11Q9H8H0 719 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 LIN28AQ9H9Z2 209 aaKnown RBP7.17□□□□□ -1.26
CD44-211ENST00000442151 ALKBH4Q9NXW9 302 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 PRODH2Q9UF12 536 aa7.17□□□□□ -1.26
CD44-211ENST00000442151 A0A0A6YYD5 115 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 DVL2O14641 736 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 ACOX3O15254 700 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 PRKNO60260 465 aaPredicted RBP7.16□□□□□ -1.26
CD44-211ENST00000442151 SH3BGRLO75368 114 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 PIAS1O75925 651 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 ZWINTO95229 277 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 GOSR1O95249 250 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 C1QAP02745 245 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 CTAGE8P0CG41 777 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 MTHFD2P13995 350 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 NT5EP21589 574 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 BSGP35613 385 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 MAGEA5P43359 124 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 KIR3DL1P43629 444 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 MASP1P48740 699 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 XKP51811 444 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 MAPK12P53778 367 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 NUP107P57740 925 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 HERVK_113P63132 956 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 ERVK-8P63133 956 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 MRPS25P82663 173 aaKnown RBP7.16□□□□□ -1.26
CD44-211ENST00000442151 ID2Q02363 134 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 MYBPHQ13203 477 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 TECRLQ5HYJ1 363 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 C18orf63Q68DL7 685 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 KIF18BQ86Y91 864 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 CTAGE4Q8IX94 777 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 DMRTC2Q8IXT2 367 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms