RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 NFKBIL1Q9UBC1 381 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ERGIC3Q9Y282 383 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 LRRK1Q38SD2 2015 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 HYKKA2RU49 373 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 FAM227AF5H4B4 570 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF182P17025 639 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 TGFBR2P37173 567 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 MTPNP58546 118 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 STX1BP61266 288 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 CD47Q08722 323 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 CHIT1Q13231 466 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 NKAIN1Q4KMZ8 207 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 TMEM214Q6NUQ4 689 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 METTL2BQ6P1Q9 378 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ANGPTL8Q6UXH0 198 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ABHD13Q7L211 337 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 MAGEE2Q8TD90 523 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 PTCHD1Q96NR3 888 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF300Q96RE9 604 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 PSD2Q9BQI7 771 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ORAI3Q9BRQ5 295 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 DUSP21Q9H596 190 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 PNO1Q9NRX1 252 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 C3orf18Q9UK00 162 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 BLOC1S6Q9UL45 172 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 AURKCQ9UQB9 309 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 OARD1Q9Y530 152 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 CLCA3PQ9Y6N3 262 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 DENND4AQ7Z401 1863 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 IGHV5-51A0A0C4DH38 117 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 TEX51A0A1B0GUA7 166 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 FUOMA2VDF0 154 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ERI3O43414 337 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 SRPX2O60687 465 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 GUCY1B2O75343 617 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 GABARAPO95166 117 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 PORP16435 677 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 GPC1P35052 558 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 DGKQP52824 942 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 C21orf58P58505 322 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 C19orf57Q0VDD7 668 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 DEFB134Q4QY38 66 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 C6orf141Q5SZD1 244 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 KRT80Q6KB66 452 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 SCIMPQ6UWF3 145 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 CYP4Z1Q86W10 505 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 DCBLD1Q8N8Z6 715 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 SELENOMQ8WWX9 145 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 BORCS5Q969J3 196 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 PPM1MQ96MI6 270 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 LPAR4Q99677 370 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 DPH1Q9BZG8 443 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 FARSBQ9NSD9 589 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 FKBP14Q9NWM8 211 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 LUZP4Q9P127 313 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 HCN3Q9P1Z3 774 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF282Q9UDV7 671 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZFYVE26Q68DK2 2539 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 A0A0A6YYC8 382 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 NSG1A0A0A6YYJ2 146 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 I3L1I5 382 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 B3GALT2O43825 422 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 DPM1O60762 260 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ERAL1O75616 437 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 LDLRP01130 860 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 AOAHP28039 575 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 PSMB5P28074 263 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 MASP1P48740 699 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 RELAQ04206 551 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLBPQ14493 270 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 WDR74Q6RFH5 385 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ASPGQ86U10 573 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 IGFN1Q86VF2 1251 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 FAM98AQ8NCA5 519 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR8K5Q8NH50 307 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 METTL6Q8TCB7 284 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 APH1BQ8WW43 257 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC29A3Q9BZD2 475 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 FBXO8Q9NRD0 319 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 PPT2Q9UMR5 302 aa6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 ARID1BQ8NFD5 2236 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-208ENST00000442054 FAM220BPB1ANY3 271 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CBFA2T3O75081 653 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 BCAS1O75363 584 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 DNAJB5O75953 348 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 B3GALT4O96024 378 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 CAPN1P07384 714 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 THRBP10828 461 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 ACPPP15309 386 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 FOLR1P15328 257 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF12P17014 697 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 DCTP40126 519 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 WNT3P56703 355 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 TBPL1P62380 186 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 BTN3A2P78410 334 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 DOC2BQ14184 412 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 NSDHLQ15738 373 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 BTBD16Q32M84 506 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 PRAMEF17Q5VTA0 474 aa6.97□□□□□ -1.29
CDC42BPA-208ENST00000442054 KDM4DQ6B0I6 523 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms