RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CIDECQ96AQ7 238 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 EME1Q96AY2 570 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TM4SF18Q96CE8 201 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MS4A6EQ96DS6 147 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 THAP11Q96EK4 314 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF570Q96NI8 536 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF285Q96NJ3 590 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SLC35A5Q9BS91 424 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ROGDIQ9GZN7 287 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GORASP2Q9H8Y8 452 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TPT1P8Q9HAU6 139 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LRCH1Q9Y2L9 728 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 URADA6NGE7 173 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RRP8O43159 456 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TPST1O60507 370 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 KLHL18O94889 574 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 KRT75O95678 551 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FAM58BPP0C7Q3 252 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 LIFP15018 202 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RORAP35398 523 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CHI3L1P36222 383 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TSFMP43897 325 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GCGRP47871 477 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CHRNB3Q05901 458 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GAB1Q13480 694 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SLC9A5Q14940 896 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ADPRMQ3LIE5 342 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CPZQ66K79 652 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 LRRC69Q6ZNQ3 347 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 VN1R4Q7Z5H5 301 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 UBE3DQ7Z6J8 389 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 IL22RA1Q8N6P7 574 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CSNK1A1LQ8N752 337 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CAMKVQ8NCB2 501 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FBXO30Q8TB52 745 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 PNPT1Q8TCS8 783 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZFP90Q8TF47 636 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CT55Q8WUE5 264 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GAL3ST3Q96A11 431 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RERGQ96A58 199 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CLIP3Q96DZ5 547 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZNF764Q96H86 408 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 OR2A5Q96R48 311 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SEPHS2Q99611 448 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MACROD1Q9BQ69 325 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SEMA6AQ9H2E6 1030 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 Q9H521 79 aa13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 LYARQ9NX58 379 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 DHCR7Q9UBM7 475 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-204ENST00000440083 C1orf226A1L170 272 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 EFSO43281 561 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TMPRSS11DO60235 418 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CREG1O75629 220 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 DRD2P14416 443 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HOXB6P17509 224 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GPX2P18283 190 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZNF10P21506 573 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HIST1H1TP22492 207 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 F8A1P23610 371 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 NTSP30990 170 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 STAT5AP42229 794 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HSPA13P48723 471 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GZMMP51124 257 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 AQP4P55087 323 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SLAMF1Q13291 335 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SFT2D3Q587I9 215 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MANEAQ5SRI9 462 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ABHD17CQ6PCB6 329 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 AMIGO2Q86SJ2 522 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZZZ3Q8IYH5 903 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZCCHC7Q8N3Z6 543 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ESX1Q8N693 406 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ANKFN1Q8N957 763 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 OR52E4Q8NGH9 312 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZFP28Q8NHY6 868 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 OR5P2Q8WZ92 322 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MR1Q95460 341 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 EXOSC8Q96B26 276 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZBED6CLQ96FA7 236 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SLC47A1Q96FL8 570 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 C10orf90Q96M02 699 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RNF145Q96MT1 663 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 DPH1Q9BZG8 443 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SLC7A5P2Q9GIP4 190 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SLC6A16Q9GZN6 736 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CHST8Q9H2A9 424 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 KLHL31Q9H511 634 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CPNE5Q9HCH3 593 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 NEUROD4Q9HD90 331 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 LHX9Q9NQ69 397 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TAS2R9Q9NYW1 312 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 IL17BQ9UHF5 180 aa13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MRPS18BQ9Y676 258 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RNF103-CHMP3A0A140T963 221 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FITM1A5D6W6 292 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms