RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CCDC92Q53HC0 331 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 TEX44Q53QW1 395 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 RABGAP1LQ5R372 815 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PDPK2PQ6A1A2 396 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SLC27A1Q6PCB7 646 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 DCUN1D2Q6PH85 259 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 MFSD7Q6UXD7 560 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PRUNE1Q86TP1 453 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TMEM173Q86WV6 379 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 CBWD2Q8IUF1 395 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CTAGE3PQ8IX95 158 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 BBS5Q8N3I7 341 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SMYD1Q8NB12 490 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 POGLUT1Q8NBL1 392 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TMEM161BQ8NDZ6 487 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 KLHDC9Q8NEP7 349 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TSPAN14Q8NG11 270 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 OR2T12Q8NG77 320 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 OR10S1Q8NGN2 331 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 MOSPD2Q8NHP6 518 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ZNF420Q8TAQ5 688 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 FNDC8Q8TC99 324 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SLC26A7Q8TE54 656 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TM9SF4Q92544 642 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CDKL2Q92772 493 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ATP6V0A1Q93050 837 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 BORCS5Q969J3 196 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SPACA9Q96E40 222 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 DCUN1D1Q96GG9 259 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SERAC1Q96JX3 654 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CNDP1Q96KN2 507 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CNDP2Q96KP4 475 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 MS4A10Q96PG2 267 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 C11orf70Q9BRQ4 267 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TMEM121Q9BTD3 319 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 NAT9Q9BTE0 207 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 OSBPL11Q9BXB4 747 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 IDI2Q9BXS1 227 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 DRC3Q9H069 523 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 VPS33BQ9H267 617 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 LHX5Q9H2C1 402 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 DPAGT1Q9H3H5 408 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SDF2L1Q9HCN8 221 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PNPLA3Q9NST1 481 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 UBAP1Q9NZ09 502 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CLIC5Q9NZA1 410 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 GDE1Q9NZC3 331 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ARMCX1Q9P291 453 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CRNNQ9UBG3 495 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 RSL24D1Q9UHA3 163 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 DCDC2Q9UHG0 476 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 POMPQ9Y244 141 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TMED5Q9Y3A6 229 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TEX264Q9Y6I9 313 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 STYXL1Q9Y6J8 313 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 DOCK5Q9H7D0 1870 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 A0A087WXM4 84 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 A0A1W2PRB8 838 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 BCLAF3A2AJT9 711 aaKnown RBP2.44□□□□□ -2.02
VPS41-206ENST00000418457 HYKKA2RU49 373 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 RGSL1A5PLK6 1076 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 GOLGA8IPA6NC78 632 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 ANKUB1A6NFN9 424 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 TMEM221A6NGB7 291 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 FAM159BA6NKW6 160 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 GOLGA8JA6NMD2 632 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 PRR32B1ATL7 298 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 PI4K2BG5E9Z4 385 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 FAM72CH0Y354 149 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 GOLGA8RI6L899 631 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 AP3B1O00203 1094 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 SLC16A4O15374 487 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 CST8O60676 142 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 NOL3O60936 208 aaKnown RBP2.44□□□□□ -2.02
VPS41-206ENST00000418457 TADA2AO75478 443 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 PDE5AO76074 875 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 H6PDO95479 791 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 STAMBPO95630 424 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 IGKV3-20P01619 116 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 HLA-DRAP01903 254 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 C1QAP02745 245 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 APOA4P06727 396 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 ZSCAN5DPP0CG00 497 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 MCF2P10911 925 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 COX4I1P13073 169 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 ETS2P15036 469 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 TNNI1P19237 187 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 KDELR1P24390 212 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 PSMA2P25787 234 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 KRT20P35900 424 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 SERPINB5P36952 375 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 DCTP40126 519 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 ELK3P41970 407 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 CAPZA2P47755 286 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 ALDH3B2P48448 385 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 PSMD8P48556 350 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 SLC1A6P48664 564 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 NUMBP49757 651 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 EIF3EP60228 445 aaKnown RBP2.44□□□□□ -2.02
VPS41-206ENST00000418457 ABCE1P61221 599 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms