RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SLC35A5Q9BS91 424 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 OSBPL10Q9BXB5 764 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 TWSG1Q9GZX9 223 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 XKR8Q9H6D3 395 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 DDX31Q9H8H2 851 aaKnown RBP16.15■□□□□ 0.18
PTPRC-206ENST00000413409 SLC6A20Q9NP91 592 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 TAS2R9Q9NYW1 312 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 NDUFA13Q9P0J0 144 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 TAAR2Q9P1P5 351 aa16.15■□□□□ 0.18
PTPRC-206ENST00000413409 SDK2Q58EX2 2172 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 A0A1W2PRB8 838 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 FEZF1A0PJY2 475 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 A1L4Q6 167 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 A6NCN8 305 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 DPM1O60762 260 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 TNFRSF21O75509 655 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 KRT75O95678 551 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 GBAP04062 536 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 ALPLP05186 524 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 EFNA1P20827 205 aaPredicted RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 PEBP1P30086 187 aaKnown RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 MVDP53602 400 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 ADARB1P78563 741 aaKnown RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 MC1RQ01726 317 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 ADPRMQ3LIE5 342 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 LIN52Q52LA3 116 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 GCNT6Q5T4J0 391 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 ZNF425Q6IV72 752 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 USP51Q70EK9 711 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 ADCK2Q7Z695 626 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 HIPK1Q86Z02 1210 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 SLC30A8Q8IWU4 369 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 ADGRF3Q8IZF5 1079 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 OR2L3Q8NG85 312 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 ZFP28Q8NHY6 868 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 OR5P2Q8WZ92 322 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 NKD1Q969G9 470 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 TM4SF18Q96CE8 201 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 RMND5BQ96G75 393 aaPredicted RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 SORBS1Q9BX66 1292 aaKnown RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 GABARAPL1Q9H0R8 117 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 LRRN3Q9H3W5 708 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 TMEM38AQ9H6F2 299 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 NEUROD4Q9HD90 331 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 LHX9Q9NQ69 397 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 SCHIP1Q9P0W5 487 aaPredicted RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 TBC1D29Q9UFV1 150 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 APOBEC3BQ9UH17 382 aaKnown RBP16.14■□□□□ 0.17
PTPRC-206ENST00000413409 MYRFQ9Y2G1 1151 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 PCDHGB5Q9Y5G0 923 aa16.14■□□□□ 0.17
PTPRC-206ENST00000413409 A0A0A6YYD5 115 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 SMIM31A0A1B0GVY4 71 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 G3V2T6 193 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 H3BNH8 94 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 PDPK1O15530 556 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 H6PDO95479 791 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 THRBP10828 461 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 BCL6P41182 706 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 FRKP42685 505 aaPredicted RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 PPP2R2BQ00005 443 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 CYBRD1Q53TN4 286 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 TRIM40Q6P9F5 258 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 PIWIL3Q7Z3Z3 882 aaKnown RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 TMPRSS9Q7Z410 1059 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 UBE3DQ7Z6J8 389 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 ATCAYQ86WG3 371 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 ZDHHC21Q8IVQ6 265 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 PNPT1Q8TCS8 783 aaKnown RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 MAGEE2Q8TD90 523 aaPredicted RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 CIDECQ96AQ7 238 aaPredicted RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 ABHD17AQ96GS6 310 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 RBM4BQ9BQ04 359 aaKnown RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 RBM4Q9BWF3 364 aaKnown RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 ASPSCR1Q9BZE9 553 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 EPS8L2Q9H6S3 715 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 IL1RAPQ9NPH3 570 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 EHD3Q9NZN3 535 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 IFT80Q9P2H3 777 aaPredicted RBP16.13■□□□□ 0.17
PTPRC-206ENST00000413409 DGKBQ9Y6T7 804 aa16.13■□□□□ 0.17
PTPRC-206ENST00000413409 PLOD2O00469 737 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 SEMA7AO75326 666 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 ZNF682O95780 498 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 C1QCP02747 245 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 ALBP02768 609 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 CHRM5P08912 532 aaPredicted RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 PABPC4LP0CB38 370 aaKnown RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 LIFP15018 202 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 UQCRC2P22695 453 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 TSFMP43897 325 aaKnown RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 SRP54P61011 504 aaKnown RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 ZNF630Q2M218 657 aaPredicted RBP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 ALG11Q2TAA5 492 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 RFX4Q33E94 735 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.12■□□□□ 0.17
PTPRC-206ENST00000413409 TBPL2Q6SJ96 375 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 CCDC80Q76M96 950 aa16.12■□□□□ 0.17
PTPRC-206ENST00000413409 PATL1Q86TB9 770 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms