RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 RNF111Q6ZNA4 994 aa28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 OR5L2Q8NGL0 311 aa28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 NUBPLQ8TB37 319 aa28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 PUM2Q8TB72 1066 aaKnown RBP eCLIP28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 C5orf34Q96MH7 638 aa28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 ZNF681Q96N22 645 aa28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 RASL10BQ96S79 203 aa28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 MYNNQ9NPC7 610 aa28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.9■■■□□ 2.22
TRAF3IP1-203ENST00000409739 TMEM114B3SHH9 223 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 LSM1O15116 133 aaKnown RBP28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 VPS4BO75351 444 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 SLC25A12O75746 678 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 HSPA4LO95757 839 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 BGNP21810 368 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 SSTR4P31391 388 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 EXOSC8Q96B26 276 aaKnown RBP28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 FCRL1Q96LA6 429 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 ZNF395Q9H8N7 513 aaPredicted RBP28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 AGPAT4Q9NRZ5 378 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 EHD3Q9NZN3 535 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 VPS4AQ9UN37 437 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 ZNF780BQ9Y6R6 833 aa28.89■■■□□ 2.22
TRAF3IP1-203ENST00000409739 FLNCQ14315 2725 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 TCP11X1B4DZS4 312 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 PTGER1P34995 402 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 UQCRFS1P47985 274 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 ABCE1P61221 599 aaKnown RBP28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 FUT7Q11130 342 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 C6orf163Q5TEZ5 329 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 FAM71E1Q6IPT2 247 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 CYP4Z2PQ8N1L4 340 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 LRRC25Q8N386 305 aaPredicted RBP28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 FAR1Q8WVX9 515 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 ASB15Q8WXK1 588 aa28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 PAIP2Q9BPZ3 127 aaKnown RBP28.88■■■□□ 2.21
TRAF3IP1-203ENST00000409739 RASAL1O95294 804 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SP1P08047 785 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 H2AFXP16104 143 aaPredicted RBP28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 DDCP20711 480 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SOX3P41225 446 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 WDR4P57081 412 aaKnown RBP28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 RPL38P63173 70 aaKnown RBP28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 KCNC4Q03721 635 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 C2orf80Q0P641 193 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 EBPQ15125 230 aaKnown RBP28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 PRICKLE4Q2TBC4 344 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 XKR7Q5GH72 579 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 HHATQ5VTY9 493 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SLC29A4Q7RTT9 530 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 BCORP1Q8N888 145 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 TMEM178AQ8NBL3 297 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 C20orf27Q9GZN8 174 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 MAT2BQ9NZL9 334 aa28.87■■■□□ 2.21
TRAF3IP1-203ENST00000409739 OR6C76A6NM76 312 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 ZNF354AO60765 605 aaPredicted RBP28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SKAP2O75563 359 aaPredicted RBP28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 GRK2P25098 689 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 TACR1P25103 407 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SLC18A1P54219 525 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 PMP22Q01453 160 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 MGAT2Q10469 447 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 MPEG1Q2M385 716 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 GALNTL6Q49A17 601 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 RFTN2Q52LD8 501 aaPredicted RBP28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SLC25A25Q6KCM7 469 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 IKBIPQ70UQ0 350 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 GALNTL5Q7Z4T8 443 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 VWA5B2Q8N398 1253 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 GAL3ST4Q96RP7 486 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 BRINP2Q9C0B6 783 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 WWTR1Q9GZV5 400 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 PFDN4Q9NQP4 134 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SLC35C2Q9NQQ7 365 aa28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 ARGLU1Q9NWB6 273 aaPredicted RBP28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 WBP11Q9Y2W2 641 aaKnown RBP28.86■■■□□ 2.21
TRAF3IP1-203ENST00000409739 HIVEP3Q5T1R4 2406 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 A8MVJ9 347 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 NME2P1O60361 137 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 OR6B1O95007 311 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 S1PR1P21453 382 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 NME2P22392 152 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 GNLYP22749 145 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 LTB4RQ15722 352 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 MAPKAPK3Q16644 382 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 AGBL2Q5U5Z8 902 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 FAM111BQ6SJ93 734 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 GPALPP1Q8IXQ4 340 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 ZNF781Q8N8C0 355 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 ZNF615Q8N8J6 731 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 ADCY4Q8NFM4 1077 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 TMEM125Q96AQ2 219 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 EGLN2Q96KS0 407 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 C3orf30Q96M34 536 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 SORT1Q99523 831 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 CCT7Q99832 543 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 CLMPQ9H6B4 373 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 OLAHQ9NV23 265 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 HPF1Q9NWY4 346 aa28.85■■■□□ 2.21
TRAF3IP1-203ENST00000409739 EXO1Q9UQ84 846 aaKnown RBP28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms