RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TP53TG5Q9Y2B4 290 aa16.45■□□□□ 0.22
CTNS-203ENST00000399306 TNRC6AQ8NDV7 1962 aaKnown RBP16.44■□□□□ 0.22
CTNS-203ENST00000399306 SCAMP2O15127 329 aaKnown RBP16.44■□□□□ 0.22
CTNS-203ENST00000399306 CELA2AP08217 269 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 G6PDP11413 515 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 EPHA3P29320 983 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 FEN1P39748 380 aaKnown RBP16.44■□□□□ 0.22
CTNS-203ENST00000399306 MLC1Q15049 377 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 GSTA3Q16772 222 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 DPY19L1Q2PZI1 675 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 ABHD17BQ5VST6 288 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 ASB18Q6ZVZ8 466 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 MAVSQ7Z434 540 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 RPS19BP1Q86WX3 136 aaKnown RBP16.44■□□□□ 0.22
CTNS-203ENST00000399306 VWA5B2Q8N398 1253 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 ZFP28Q8NHY6 868 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 CDC26Q8NHZ8 85 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 SUN3Q8TAQ9 357 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 EXOSC8Q96B26 276 aaKnown RBP16.44■□□□□ 0.22
CTNS-203ENST00000399306 PPCDCQ96CD2 204 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 COQ8BQ96D53 544 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 ZBED6CLQ96FA7 236 aaPredicted RBP16.44■□□□□ 0.22
CTNS-203ENST00000399306 BBS4Q96RK4 519 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 CCDC28BQ9BUN5 200 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 C1orf50Q9BV19 199 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 BRINP2Q9C0B6 783 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 OR8D2Q9GZM6 311 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 AIG1Q9NVV5 245 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 MAT2BQ9NZL9 334 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 ZNF223Q9UK11 482 aaPredicted RBP16.44■□□□□ 0.22
CTNS-203ENST00000399306 CFL2Q9Y281 166 aa16.44■□□□□ 0.22
CTNS-203ENST00000399306 A0A087WV62 115 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 TRBV11-1A0A0K0K1C0 115 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 GABRR3A8MPY1 467 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 TCP11X1B4DZS4 312 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 PLOD2O00469 737 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 PLOD3O60568 738 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 IDO1P14902 403 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 NT5EP21589 574 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 MDH1P40925 334 aaKnown RBP16.43■□□□□ 0.22
CTNS-203ENST00000399306 MRPL19P49406 292 aaKnown RBP16.43■□□□□ 0.22
CTNS-203ENST00000399306 CLNS1AP54105 237 aaKnown RBP16.43■□□□□ 0.22
CTNS-203ENST00000399306 SLC37A1P57057 533 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 MLF1P58340 268 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 RNF4P78317 190 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 MGAT2Q10469 447 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 ZNF267Q14586 743 aaPredicted RBP16.43■□□□□ 0.22
CTNS-203ENST00000399306 PTGR1Q14914 329 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 ZNF628Q5EBL2 1059 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 ACER2Q5QJU3 275 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 RNF111Q6ZNA4 994 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 DGAT2L6Q6ZPD8 337 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 ACAD11Q709F0 780 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 CCDC116Q8IYX3 515 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 ZADH2Q8N4Q0 377 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 C17orf47Q8NEP4 570 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 SLC39A7Q92504 469 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 TESCQ96BS2 214 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 PPP1R36Q96LQ0 422 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 WDR55Q9H6Y2 383 aaPredicted RBP16.43■□□□□ 0.22
CTNS-203ENST00000399306 PTGFRNQ9P2B2 879 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 ERVK-19Q9WJR5 959 aa16.43■□□□□ 0.22
CTNS-203ENST00000399306 MYOCOSA0A1B0GUC4 107 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 A0A1W2PS29 197 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 FCHO1O14526 889 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 PDPK1O15530 556 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 S1PR1P21453 382 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 TRHRP34981 398 aaPredicted RBP16.42■□□□□ 0.22
CTNS-203ENST00000399306 DIO3P55073 304 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 SRSF11Q05519 484 aaKnown RBP16.42■□□□□ 0.22
CTNS-203ENST00000399306 MPEG1Q2M385 716 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 SLC9B1Q4ZJI4 515 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 FAM47EQ6ZV65 393 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 KIF2BQ8N4N8 673 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 SIRT6Q8N6T7 355 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 ZNF615Q8N8J6 731 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 TP53INP1Q96A56 240 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 AMDHD1Q96NU7 426 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 CNPPD1Q9BV87 410 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 BHLHE41Q9C0J9 482 aaPredicted RBP16.42■□□□□ 0.22
CTNS-203ENST00000399306 TRIM45Q9H8W5 580 aaPredicted RBP16.42■□□□□ 0.22
CTNS-203ENST00000399306 STMN3Q9NZ72 180 aa16.42■□□□□ 0.22
CTNS-203ENST00000399306 YARS2Q9Y2Z4 477 aaKnown RBP16.42■□□□□ 0.22
CTNS-203ENST00000399306 BOD1L1Q8NFC6 3051 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 DYTNA2CJ06 578 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 ANKRD28O15084 1053 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
CTNS-203ENST00000399306 AKAP10O43572 662 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 DIAPH2O60879 1101 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 PDGFAP04085 211 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 ALDOCP09972 364 aaKnown RBP16.41■□□□□ 0.22
CTNS-203ENST00000399306 CT62P0C5K7 136 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 NCBP2P52298 156 aaKnown RBP eCLIP16.41■□□□□ 0.22
CTNS-203ENST00000399306 PSPHP78330 225 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 DUSP2Q05923 314 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 LY6DQ14210 128 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 ZNF750Q32MQ0 723 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 LSM12Q3MHD2 195 aaKnown RBP16.41■□□□□ 0.22
CTNS-203ENST00000399306 PDCD4Q53EL6 469 aaKnown RBP16.41■□□□□ 0.22
CTNS-203ENST00000399306 CPTPQ5TA50 214 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms