RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MS4A12Q9NXJ0 267 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 HBQ1P09105 142 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 H2BFMP0C1H6 154 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 DNAJB1P25685 340 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 RBM34P42696 430 aaKnown RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 RPS15AP62244 130 aaKnown RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CLDN10P78369 228 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 SHC2P98077 582 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 NFE2L1Q14494 772 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 GBX1Q14549 363 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 TRAM2Q15035 370 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 NAA11Q9BSU3 229 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 STRA6Q9BX79 667 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CWH43Q9H720 699 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 RPH3AQ9Y2J0 694 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 ARL6IP5O75915 188 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 RNH1P13489 461 aaKnown RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF35P13682 527 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 IL1RNP18510 177 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CTGFP29279 349 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 NAA10P41227 235 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 WNT7BP56706 349 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CDKN3Q16667 212 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CATSPEREQ5SY80 951 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 LINC00471Q8N535 108 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CLEC1AQ8NC01 280 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 FRS2Q8WU20 508 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 F2RL3Q96RI0 385 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 STARD5Q9NSY2 213 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 XPNPEP2O43895 674 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 EDN1P05305 212 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 CD38P28907 300 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC18A1P54219 525 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 GAS6Q14393 721 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 C18orf21Q32NC0 220 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 ANKDD1AQ495B1 522 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 PARM1Q6UWI2 310 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 FUZQ9BT04 418 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 TMEM121BQ9BXQ6 578 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 SARDHQ9UL12 918 aa13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 TIMM8BQ9Y5J9 83 aaPredicted RBP13.6□□□□□ -0.23
PCDHA11-201ENST00000398640 SOCS2O14508 198 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 DCNP07585 359 aaKnown RBP13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 C1GALT1C1LP0DN25 315 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 FASLGP48023 281 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 SCAPQ12770 1279 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 RAB11FIP2Q7L804 512 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 CARM1Q86X55 608 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 GPR137CQ8N3F9 429 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 OR5L2Q8NGL0 311 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 APOOQ9BUR5 198 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF350Q9GZX5 532 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF701Q9NV72 531 aaPredicted RBP13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 MATN2O00339 956 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF821O75541 412 aaPredicted RBP13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 PROS1P07225 676 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 GMPRP36959 345 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 RPS26P62854 115 aaKnown RBP13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 STK11Q15831 433 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF550Q7Z398 422 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 EID2Q8N6I1 236 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 OR51A7Q8NH64 312 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 LMO3Q8TAP4 145 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 ALG5Q9Y673 324 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 OR6C70A6NIJ9 312 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 AURKAO14965 403 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 ACADVLP49748 655 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 GSTM4Q03013 218 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 FIGNL1Q6PIW4 674 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 WDTC1Q8N5D0 677 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 THAP6Q8TBB0 222 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC22A1O15245 554 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 MPP7Q5T2T1 576 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 TRAPPC6BQ86SZ2 158 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 LAS2Q8IYD9 372 aa13.59□□□□□ -0.23
PCDHA11-201ENST00000398640 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 MT-ND5P03915 603 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 FPR1P21462 350 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 ELK4P28324 431 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 GNRHRP30968 328 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 ABHD18Q0P651 414 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 C1orf220Q5T0J3 134 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 FIGLAQ6QHK4 219 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 TMIEQ8NEW7 156 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM174AQ8TBP5 190 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 ASB12Q8WXK4 309 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 PPP1R14BQ96C90 147 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 S100A16Q96FQ6 103 aaKnown RBP13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 DPAGT1Q9H3H5 408 aa13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 SRA1Q9HD15 236 aaKnown RBP13.58□□□□□ -0.23
PCDHA11-201ENST00000398640 POLR1CO15160 346 aaPredicted RBP13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC16A5O15375 505 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 CLIC3O95833 236 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 EGFP01133 1207 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 GGT2P36268 569 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 P2RY2P41231 377 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 DIO3P55073 304 aa13.58□□□□□ -0.24
PCDHA11-201ENST00000398640 RPL19P84098 196 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms