RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 LHPPQ9H008 270 aa23.71■■□□□ 1.39
U2AF1-203ENST00000398137 EHD3Q9NZN3 535 aa23.71■■□□□ 1.39
U2AF1-203ENST00000398137 DCTN4Q9UJW0 460 aa23.71■■□□□ 1.39
U2AF1-203ENST00000398137 PSME2Q9UL46 239 aa23.71■■□□□ 1.39
U2AF1-203ENST00000398137 HIVEP3Q5T1R4 2406 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 NBPF19A0A087WUL8 3843 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 SAGE2PA6NJ88 616 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 OR10H2O60403 315 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 KLHL41O60662 606 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 ALDOCP09972 364 aaKnown RBP23.7■■□□□ 1.38
U2AF1-203ENST00000398137 CPMP14384 443 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 FEN1P39748 380 aaKnown RBP23.7■■□□□ 1.38
U2AF1-203ENST00000398137 STT3AP46977 705 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 XKP51811 444 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 ELAVL1Q15717 326 aaKnown RBP23.7■■□□□ 1.38
U2AF1-203ENST00000398137 PRSS53Q2L4Q9 553 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 ANKRD26P1Q6NSI1 321 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 ACAD11Q709F0 780 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 ZADH2Q8N4Q0 377 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 PSMF1Q92530 271 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 PPWD1Q96BP3 646 aaKnown RBP23.7■■□□□ 1.38
U2AF1-203ENST00000398137 THOC3Q96J01 351 aaKnown RBP23.7■■□□□ 1.38
U2AF1-203ENST00000398137 MARK4Q96L34 752 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 IMMP1LQ96LU5 166 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 CNTRLQ7Z7A1 2325 aa23.7■■□□□ 1.38
U2AF1-203ENST00000398137 POLR3GO15318 223 aaPredicted RBP23.69■■□□□ 1.38
U2AF1-203ENST00000398137 CELA2AP08217 269 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 HPCAL1P37235 193 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 LSM12Q3MHD2 195 aaKnown RBP23.69■■□□□ 1.38
U2AF1-203ENST00000398137 TMEM198Q66K66 360 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 DGAT2L6Q6ZPD8 337 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 SPATA19Q7Z5L4 167 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 ST13P4Q8IZP2 240 aaPredicted RBP23.69■■□□□ 1.38
U2AF1-203ENST00000398137 KRTCAP2Q8N6L1 136 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 CNRIP1Q96F85 164 aaPredicted RBP23.69■■□□□ 1.38
U2AF1-203ENST00000398137 REEP4Q9H6H4 257 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 TCF7L2Q9NQB0 619 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 GIMAP4Q9NUV9 329 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 FAM53CQ9NYF3 392 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 ZNF780BQ9Y6R6 833 aa23.69■■□□□ 1.38
U2AF1-203ENST00000398137 UTP20O75691 2785 aaKnown RBP23.68■■□□□ 1.38
U2AF1-203ENST00000398137 CBX6O95503 412 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 SLC35E2P0CK97 266 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 TROVE2P10155 538 aaKnown RBP eCLIP23.68■■□□□ 1.38
U2AF1-203ENST00000398137 COX7A2P14406 83 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 TNNI3P19429 210 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 SLC26A5P58743 744 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 DUSP2Q05923 314 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 EIF2S3LQ2VIR3 472 aaKnown RBP23.68■■□□□ 1.38
U2AF1-203ENST00000398137 BTBD16Q32M84 506 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 AGAP7PQ5VUJ5 663 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 CGB2Q6NT52 195 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 CEP70Q8NHQ1 597 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 DOK4Q8TEW6 326 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 TM9SF4Q92544 642 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 PPCDCQ96CD2 204 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 AGAP4Q96P64 663 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 ZNF317Q96PQ6 595 aaPredicted RBP23.68■■□□□ 1.38
U2AF1-203ENST00000398137 PELOQ9BRX2 385 aaKnown RBP23.68■■□□□ 1.38
U2AF1-203ENST00000398137 SLC35C2Q9NQQ7 365 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 AIG1Q9NVV5 245 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 ENTPD4Q9Y227 616 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 CLCA3PQ9Y6N3 262 aa23.68■■□□□ 1.38
U2AF1-203ENST00000398137 ICE1Q9Y2F5 2266 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 CPAMD8Q8IZJ3 1885 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 C17orf105B2RV13 164 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 SCAMP2O15127 329 aaKnown RBP23.67■■□□□ 1.38
U2AF1-203ENST00000398137 PORP16435 677 aaPredicted RBP23.67■■□□□ 1.38
U2AF1-203ENST00000398137 CSNK2A2P19784 350 aaPredicted RBP23.67■■□□□ 1.38
U2AF1-203ENST00000398137 PTGER1P34995 402 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 SF3A3Q12874 501 aaKnown RBP eCLIP23.67■■□□□ 1.38
U2AF1-203ENST00000398137 BIKQ13323 160 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 PDE7AQ13946 482 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 TERF2Q15554 542 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 EXT1Q16394 746 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 ZNF385BQ569K4 471 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 PLAG1Q6DJT9 500 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 C7orf57Q8NEG2 295 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 PTPMT1Q8WUK0 201 aaPredicted RBP23.67■■□□□ 1.38
U2AF1-203ENST00000398137 RBM18Q96H35 190 aaKnown RBP23.67■■□□□ 1.38
U2AF1-203ENST00000398137 ZNF681Q96N22 645 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 MAP10Q9P2G4 905 aa23.67■■□□□ 1.38
U2AF1-203ENST00000398137 A0A0G2JND7 137 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 E9PBE3 544 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 NME5P56597 212 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 FHL5Q5TD97 284 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 KBTBD2Q8IY47 623 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 LRRC25Q8N386 305 aaPredicted RBP23.66■■□□□ 1.38
U2AF1-203ENST00000398137 NFAM1Q8NET5 270 aaPredicted RBP23.66■■□□□ 1.38
U2AF1-203ENST00000398137 OR7A2PQ8NGA2 310 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 OR14A16Q8NHC5 309 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 NUDT8Q8WV74 236 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 DAZLQ92904 295 aaKnown RBP23.66■■□□□ 1.38
U2AF1-203ENST00000398137 BBS4Q96RK4 519 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 SIKE1Q9BRV8 207 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 CCDC28BQ9BUN5 200 aa23.66■■□□□ 1.38
U2AF1-203ENST00000398137 GABRR3A8MPY1 467 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 UBDO15205 165 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 SERPINA7P05543 415 aa23.65■■□□□ 1.38
U2AF1-203ENST00000398137 PRPS1L1P21108 318 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms