RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 FAAH2Q6GMR7 532 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 FAM111BQ6SJ93 734 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 DGAT2L6Q6ZPD8 337 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 RNF130Q86XS8 419 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 FAM13CQ8NE31 585 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 WDR36Q8NI36 951 aaKnown RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 FAM120BQ96EK7 910 aaKnown RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 SH3GL1Q99961 368 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 KCTD14Q9BQ13 255 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 PCDHAC1Q9H158 963 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 SEMA3GQ9NS98 782 aa19.86■□□□□ 0.77
CPNE1-204ENST00000397443 ZCCHC3Q9NUD5 404 aaKnown RBP19.86■□□□□ 0.77
CPNE1-204ENST00000397443 BLACEA4D250 179 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 STK17BO94768 372 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 AGXTP21549 392 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 ME2P23368 584 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 CRATP43155 626 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 COX20Q5RI15 118 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 SIMC1Q8NDZ2 872 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 RBM18Q96H35 190 aaKnown RBP19.85■□□□□ 0.77
CPNE1-204ENST00000397443 ASPSCR1Q9BZE9 553 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 CHST8Q9H2A9 424 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 KAT8Q9H7Z6 458 aaKnown RBP19.85■□□□□ 0.77
CPNE1-204ENST00000397443 EQTNQ9NQ60 294 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 CD300AQ9UGN4 299 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 EGFL7Q9UHF1 273 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 CLDN16Q9Y5I7 305 aa19.85■□□□□ 0.77
CPNE1-204ENST00000397443 SLC30A4O14863 429 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 CIB2O75838 187 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 ZGLP1P0C6A0 271 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 EIF3IQ13347 325 aaKnown RBP19.84■□□□□ 0.77
CPNE1-204ENST00000397443 TRMT12Q53H54 448 aaKnown RBP19.84■□□□□ 0.77
CPNE1-204ENST00000397443 FAM69BQ5VUD6 431 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 OR7G2Q8NG99 324 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 ELP4Q96EB1 424 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 DGAT2Q96PD7 388 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 DPH2Q9BQC3 489 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-204ENST00000397443 VN1R1Q9GZP7 353 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 PNO1Q9NRX1 252 aaKnown RBP19.84■□□□□ 0.77
CPNE1-204ENST00000397443 FOXJ2Q9P0K8 574 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 SPTBN2O15020 2390 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 A8MUA0 341 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 C9orf172C9J069 976 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 KCNK5O95279 499 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 ATP1B1P05026 303 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 SLC35E2P0CK97 266 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 NSDHLQ15738 373 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 CYP51A1Q16850 503 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 C1orf146Q5VVC0 180 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 OVCH1Q7RTY7 1134 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 C6orf120Q7Z4R8 191 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 HIPK4Q8NE63 616 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 PSMA8Q8TAA3 256 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 FBXO30Q8TB52 745 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 WDR60Q8WVS4 1066 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 OTUB1Q96FW1 271 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-204ENST00000397443 YIPF4Q9BSR8 244 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 DDX18Q9NVP1 670 aaKnown RBP19.84■□□□□ 0.77
CPNE1-204ENST00000397443 AHCTF1Q8WYP5 2266 aa19.84■□□□□ 0.77
CPNE1-204ENST00000397443 DNAJA2O60884 412 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 TNFSF15O95150 251 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 CT62P0C5K7 136 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 OR4D2P58180 307 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 MS4A2Q01362 244 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 RHAGQ02094 409 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 RGNQ15493 299 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 TNFAIP8L2Q6P589 184 aaPredicted RBP19.83■□□□□ 0.77
CPNE1-204ENST00000397443 ZNF583Q96ND8 569 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 GPATCH2Q9NW75 528 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 POMPQ9Y244 141 aa19.83■□□□□ 0.77
CPNE1-204ENST00000397443 CNOT3O75175 753 aaKnown RBP19.82■□□□□ 0.76
CPNE1-204ENST00000397443 KRT75O95678 551 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 NUDT7P0C024 238 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 ETFAP13804 333 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 TNNI3P19429 210 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 IL10P22301 178 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 PGDP52209 483 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 EEFSECP57772 596 aaKnown RBP19.82■□□□□ 0.76
CPNE1-204ENST00000397443 NKG7Q16617 165 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 ZNF628Q5EBL2 1059 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 TMEM164Q5U3C3 297 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 SAXO2Q658L1 398 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 QSOX2Q6ZRP7 698 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 TMPRSS12Q86WS5 348 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 ST13P4Q8IZP2 240 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-204ENST00000397443 NUP43Q8NFH3 380 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 RIT1Q92963 219 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 DDA1Q9BW61 102 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 GPN3Q9UHW5 284 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-204ENST00000397443 MMACHCQ9Y4U1 282 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 NUP210LQ5VU65 1888 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 UPK1AO00322 258 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 EMC8O43402 210 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 NCK1P16333 377 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 KPNB1Q14974 876 aaKnown RBP19.82■□□□□ 0.76
CPNE1-204ENST00000397443 EXOSC7Q15024 291 aaKnown RBP19.82■□□□□ 0.76
CPNE1-204ENST00000397443 RSPO4Q2I0M5 234 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-204ENST00000397443 PRICKLE4Q2TBC4 344 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 LANCL3Q6ZV70 420 aa19.82■□□□□ 0.76
CPNE1-204ENST00000397443 WDR53Q7Z5U6 358 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms