RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 NTSP30990 170 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 TRPC1P48995 793 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 CAPRIN1Q14444 709 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 HIST2H2BCQ6DN03 193 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 SLC48A1Q6P1K1 146 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 DNAJC14Q6Y2X3 702 aaPredicted RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 METTL27Q8N6F8 245 aaPredicted RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 TEX19Q8NA77 164 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 OR4A15Q8NGL6 344 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 UTP4Q969X6 686 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 MVB12AQ96EY5 273 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 CCDC115Q96NT0 180 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 GBP5Q96PP8 586 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 BBS4Q96RK4 519 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 CDRT15Q96T59 188 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 CGREF1Q99674 301 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 RPF2Q9H7B2 306 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 SERHLQ9NQF3 203 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 SLC35C2Q9NQQ7 365 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 TAS2R7Q9NYW3 318 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 HCN3Q9P1Z3 774 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 PRPF19Q9UMS4 504 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 SRPK3Q9UPE1 567 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ENTPD4Q9Y227 616 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 L3MBTL1Q9Y468 752 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 ZNF780BQ9Y6R6 833 aa12.44□□□□□ -0.42
SEC13-209ENST00000397117 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.44□□□□□ -0.42
SEC13-209ENST00000397117 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 C15orf38-AP3S2A0A0A6YYH1 394 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 A0A1W2PRB8 838 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 CHST10O43529 356 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 SCN2BO60939 215 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 DNAJB6O75190 326 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 ERAL1O75616 437 aaKnown RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 RNH1P13489 461 aaKnown RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 MANFP55145 182 aaKnown RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 RAB38P57729 211 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 OR52E8Q6IFG1 317 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 C6orf15Q6UXA7 325 aaPredicted RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 DLEU7Q6UYE1 221 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 ARPINQ7Z6K5 226 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 BPHLQ86WA6 291 aaPredicted RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 PPP1R3BQ86XI6 285 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 TMEM126BQ8IUX1 230 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 CLECL1Q8IZS7 167 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 DNAJB14Q8TBM8 379 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 ADAMTS18Q8TE60 1221 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 MIEF2Q96C03 454 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 ZBED6CLQ96FA7 236 aaPredicted RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 GPATCH1Q9BRR8 931 aaKnown RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 INPP5KQ9BT40 448 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 PRDM9Q9NQV7 894 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
SEC13-209ENST00000397117 MRPS33Q9Y291 106 aaKnown RBP12.43□□□□□ -0.42
SEC13-209ENST00000397117 SCN3AQ9NY46 2000 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 CENPEQ02224 2701 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 A0A1B0GX78 115 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 FXYD1O00168 92 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 DSCR3O14972 297 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 C6orf47O95873 294 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 GSNP06396 782 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 ABCB1P08183 1280 aaPredicted RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 DLSTP36957 453 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 SLC7A2P52569 658 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 HNRNPFP52597 415 aaKnown RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 IL11RAQ14626 422 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 PRSS53Q2L4Q9 553 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 LRIF1Q5T3J3 769 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 PRAMEF17Q5VTA0 474 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 FAM180BQ6P0A1 224 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 C8orf82Q6P1X6 216 aaPredicted RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 ZNF621Q6ZSS3 439 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 ASB18Q6ZVZ8 466 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 SCUBE1Q8IWY4 988 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 ULK2Q8IYT8 1036 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 SAMD14Q8IZD0 417 aaPredicted RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 DTWD1Q8N5C7 304 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 TRIML2Q8N7C3 387 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 ZFP28Q8NHY6 868 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 OR5P2Q8WZ92 322 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 UCN3Q969E3 161 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 CSF3RQ99062 836 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 SH3GL1Q99961 368 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 YIPF2Q9BWQ6 316 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 PAIP1Q9H074 479 aaKnown RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 DHCR7Q9UBM7 475 aaKnown RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 PLEKHB1Q9UF11 243 aaPredicted RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 CES1P1Q9UKY3 287 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 POLHQ9Y253 713 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 PCDHB3Q9Y5E6 796 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 PCDHB14Q9Y5E9 798 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 SPENQ96T58 3664 aaKnown RBP12.42□□□□□ -0.42
SEC13-209ENST00000397117 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
SEC13-209ENST00000397117 H0YHG0 523 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 SCRG1O75711 98 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 RECKO95980 971 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 HBQ1P09105 142 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 SLC6A2P23975 617 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms