RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 IGKV3-11P04433 115 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 JUNP05412 331 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ITGAMP11215 1152 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 TACR1P25103 407 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 SOX11P35716 441 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 HPCAL1P37235 193 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 FEN1P39748 380 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 CLDN8P56748 225 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 C21orf58P58505 322 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ID2Q02363 134 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 FUT7Q11130 342 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 MFAP5Q13361 173 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 PDE7AQ13946 482 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF267Q14586 743 aaPredicted RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 MEP1AQ16819 746 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 PRICKLE4Q2TBC4 344 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 LACTB2Q53H82 288 aaPredicted RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ACER2Q5QJU3 275 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ABHD17BQ5VST6 288 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 EPGNQ6UW88 154 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 HSDL2Q6YN16 418 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ASB18Q6ZVZ8 466 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ACAD11Q709F0 780 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 RPS19BP1Q86WX3 136 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 TICAM1Q8IUC6 712 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 GALNT12Q8IXK2 581 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 LIX1Q8N485 282 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ZADH2Q8N4Q0 377 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ZFP28Q8NHY6 868 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 CDC26Q8NHZ8 85 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 SLC2A12Q8TD20 617 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF675Q8TD23 568 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 BRIX1Q8TDN6 353 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF721Q8TF20 911 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 HAS2Q92819 552 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 UCN3Q969E3 161 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 NCLNQ969V3 563 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 EXOSC8Q96B26 276 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 PPWD1Q96BP3 646 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 PPCDCQ96CD2 204 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 CTHRC1Q96CG8 243 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 COQ8BQ96D53 544 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ZBED6CLQ96FA7 236 aaPredicted RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 TSSK3Q96PN8 268 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 NUDT9Q9BW91 350 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 OR8D2Q9GZM6 311 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 RNF32Q9H0A6 362 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 CXorf21Q9HAI6 301 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 SLCO1B3Q9NPD5 702 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ACSS1Q9NUB1 689 aaPredicted RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ATAD3AQ9NVI7 634 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 SH3BP4Q9P0V3 963 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ABI3Q9P2A4 366 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 PTGFRNQ9P2B2 879 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 MARCOQ9UEW3 520 aaPredicted RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 BAIAP2L1Q9UHR4 511 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 ATP6V1HQ9UI12 483 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 EXO1Q9UQ84 846 aaKnown RBP6.3□□□□□ -1.4
UBBP1-201ENST00000392399 USH1CQ9Y6N9 552 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 CFAP46Q8IYW2 2715 aa6.3□□□□□ -1.4
UBBP1-201ENST00000392399 SMG1Q96Q15 3661 aaKnown RBP6.29□□□□□ -1.4
UBBP1-201ENST00000392399 A0A087WV62 115 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 TRBV11-1A0A0K0K1C0 115 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 MYOCOSA0A1B0GUC4 107 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 DYTNA2CJ06 578 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 GABRR3A8MPY1 467 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 TCP11X1B4DZS4 312 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 MASP2O00187 686 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 PLOD2O00469 737 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 FCHO1O14526 889 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 SCAMP2O15127 329 aaKnown RBP6.29□□□□□ -1.4
UBBP1-201ENST00000392399 PLOD3O60568 738 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 EDF1O60869 148 aaKnown RBP6.29□□□□□ -1.4
UBBP1-201ENST00000392399 G6PDP11413 515 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 IDO1P14902 403 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 NT5EP21589 574 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 EPHA3P29320 983 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 NTSP30990 170 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 LSP1P33241 339 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 FRKP42685 505 aaPredicted RBP6.29□□□□□ -1.4
UBBP1-201ENST00000392399 CLNS1AP54105 237 aaKnown RBP6.29□□□□□ -1.4
UBBP1-201ENST00000392399 DIO3P55073 304 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 SLC37A1P57057 533 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 GNGT1P63211 74 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 RNF4P78317 190 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 PSPHP78330 225 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 SRSF11Q05519 484 aaKnown RBP6.29□□□□□ -1.4
UBBP1-201ENST00000392399 MGAT2Q10469 447 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 KLRB1Q12918 225 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 LY6DQ14210 128 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 MLC1Q15049 377 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 RPS6KA2Q15349 733 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 GSTA3Q16772 222 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 MPEG1Q2M385 716 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 SLC9B1Q4ZJI4 515 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 CPTPQ5TA50 214 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 NXNQ6DKJ4 435 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 BLOC1S3Q6QNY0 202 aa6.29□□□□□ -1.4
UBBP1-201ENST00000392399 RNF111Q6ZNA4 994 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms