RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CNPPD1Q9BV87 410 aa13.9□□□□□ -0.18
SUMO1-203ENST00000392246 BHLHE41Q9C0J9 482 aaPredicted RBP13.9□□□□□ -0.18
SUMO1-203ENST00000392246 NSRP1Q9H0G5 558 aaKnown RBP13.9□□□□□ -0.18
SUMO1-203ENST00000392246 CLMPQ9H6B4 373 aa13.9□□□□□ -0.18
SUMO1-203ENST00000392246 SDR39U1Q9NRG7 319 aaPredicted RBP13.9□□□□□ -0.18
SUMO1-203ENST00000392246 ZIM2Q9NZV7 527 aa13.9□□□□□ -0.18
SUMO1-203ENST00000392246 COPS7AQ9UBW8 275 aa13.9□□□□□ -0.18
SUMO1-203ENST00000392246 PKD1L2Q7Z442 2459 aa13.9□□□□□ -0.18
SUMO1-203ENST00000392246 CACNA1BQ00975 2339 aa13.9□□□□□ -0.18
SUMO1-203ENST00000392246 DSPP15924 2871 aaKnown RBP13.9□□□□□ -0.18
SUMO1-203ENST00000392246 SLC22A3O75751 556 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 CEACAM4O75871 244 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 ITGAMP11215 1152 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 FRKP42685 505 aaPredicted RBP13.9□□□□□ -0.19
SUMO1-203ENST00000392246 MRPL19P49406 292 aaKnown RBP13.9□□□□□ -0.19
SUMO1-203ENST00000392246 MANFP55145 182 aaKnown RBP13.9□□□□□ -0.19
SUMO1-203ENST00000392246 POLE2P56282 527 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 STX1BP61266 288 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 SF3A3Q12874 501 aaKnown RBP eCLIP13.9□□□□□ -0.19
SUMO1-203ENST00000392246 MYBPC3Q14896 1274 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 MPEG1Q2M385 716 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 DPY19L1Q2PZI1 675 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 PGS1Q32NB8 556 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 METTL21CQ5VZV1 264 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 MIER2Q8N344 545 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 AMER2Q8N7J2 671 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 GLB1L3Q8NCI6 653 aaPredicted RBP13.9□□□□□ -0.19
SUMO1-203ENST00000392246 ADCY4Q8NFM4 1077 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 OR9A2Q8NGT5 310 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 ZFP28Q8NHY6 868 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 ZNF675Q8TD23 568 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 DOK4Q8TEW6 326 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 NUDT8Q8WV74 236 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 AMDHD1Q96NU7 426 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 DUSP26Q9BV47 211 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 SEMA4CQ9C0C4 833 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 GLIPR2Q9H4G4 154 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 ACSS1Q9NUB1 689 aaPredicted RBP13.9□□□□□ -0.19
SUMO1-203ENST00000392246 MAT2BQ9NZL9 334 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 ERVK-19Q9WJR5 959 aa13.9□□□□□ -0.19
SUMO1-203ENST00000392246 HRKO00198 91 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 SLITRK5O94991 958 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 IGKV3-11P04433 115 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 CT62P0C5K7 136 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 NCF2P19878 526 aaPredicted RBP13.89□□□□□ -0.19
SUMO1-203ENST00000392246 KIR3DL1P43629 444 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 MGAT2Q10469 447 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 FUT7Q11130 342 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 LTB4RQ15722 352 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 LINC00303Q3SY05 128 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 ZNF628Q5EBL2 1059 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 FAM111BQ6SJ93 734 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 CPLX4Q7Z7G2 160 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 VWA5B2Q8N398 1253 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 KIF2BQ8N4N8 673 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 FDCSPQ8NFU4 85 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 OR7G1Q8NGA0 311 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 OR8J2Q8NGG1 315 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 BRIX1Q8TDN6 353 aaKnown RBP13.89□□□□□ -0.19
SUMO1-203ENST00000392246 TTC9Q92623 222 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 CTHRC1Q96CG8 243 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 ERP27Q96DN0 273 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 TEX37Q96LM6 180 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 SLC25A23Q9BV35 468 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 NUDT9Q9BW91 350 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 DEFB126Q9BYW3 111 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 SLAMF7Q9NQ25 335 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.89□□□□□ -0.19
SUMO1-203ENST00000392246 GPR83Q9NYM4 423 aa13.89□□□□□ -0.19
SUMO1-203ENST00000392246 NUP214P35658 2090 aaPredicted RBP13.89□□□□□ -0.19
SUMO1-203ENST00000392246 TRBV11-1A0A0K0K1C0 115 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 A0A1W2PRB8 838 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 MKRN2OSH3BPM6 223 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 ZFAND5O76080 213 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 DRD4P21917 467 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 PTGER1P34995 402 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 ATP4BP51164 291 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 MLC1Q15049 377 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 AGAP7PQ5VUJ5 663 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 H3F3CQ6NXT2 135 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 HSDL2Q6YN16 418 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 RNF111Q6ZNA4 994 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 ZNF321PQ8N8H1 164 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 VPS37AQ8NEZ2 397 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 OR8K3Q8NH51 312 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 PSMF1Q92530 271 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 KAT2AQ92830 837 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 AGAP4Q96P64 663 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
SUMO1-203ENST00000392246 FAM107BQ9H098 131 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 ZNF639Q9UID6 485 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 ZNF223Q9UK11 482 aaPredicted RBP13.88□□□□□ -0.19
SUMO1-203ENST00000392246 ADAM21Q9UKJ8 722 aa13.88□□□□□ -0.19
SUMO1-203ENST00000392246 PCDHGA9Q9Y5G4 932 aaKnown RBP13.88□□□□□ -0.19
SUMO1-203ENST00000392246 COPG1Q9Y678 874 aaKnown RBP13.88□□□□□ -0.19
SUMO1-203ENST00000392246 A8MUI8 341 aa13.87□□□□□ -0.19
SUMO1-203ENST00000392246 ERVH48-1M5A8F1 160 aa13.87□□□□□ -0.19
SUMO1-203ENST00000392246 PLOD2O00469 737 aa13.87□□□□□ -0.19
SUMO1-203ENST00000392246 PLOD3O60568 738 aa13.87□□□□□ -0.19
SUMO1-203ENST00000392246 BCAS2O75934 225 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms