RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CDC26Q8NHZ8 85 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 SLC2A12Q8TD20 617 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 THAP3Q8WTV1 239 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 HAS2Q92819 552 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 TM4SF18Q96CE8 201 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 RBM18Q96H35 190 aaKnown RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 PELOQ9BRX2 385 aaKnown RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 TMBIM4Q9HC24 238 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 ARGLU1Q9NWB6 273 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-202ENST00000380747 ANKRD10Q9NXR5 420 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 MCM8Q9UJA3 840 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 VPS4AQ9UN37 437 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 PCDHA9Q9Y5H5 950 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 PTGDR2Q9Y5Y4 395 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 ACTL7BQ9Y614 415 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 MED13Q9UHV7 2174 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 CELSR1Q9NYQ6 3014 aa8.6□□□□□ -1.03
HMGN1-202ENST00000380747 CACNA1DQ01668 2161 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 A0A1W2PS29 197 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 OR5H15A6NDH6 313 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 GABRR3A8MPY1 467 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 TMEM233B4DJY2 109 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 RGS14O43566 566 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ERAL1O75616 437 aaKnown RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ZFAND5O76080 213 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ZWINTO95229 277 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 HSPA4LO95757 839 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 DDAH2O95865 285 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 IL3P08700 152 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ANXA4P09525 319 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 LINC00032P0C843 101 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 NT5EP21589 574 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 TIA1P31483 386 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■■□□□ 12.1
HMGN1-202ENST00000380747 TNFSF10P50591 281 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 MLF1P58340 268 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 MAGOHP61326 146 aaKnown RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 TRA2BP62995 288 aaKnown RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 RAE1P78406 368 aaKnown RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 BIKQ13323 160 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 MPP2Q14168 576 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 CHI3L2Q15782 390 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 HHATQ5VTY9 493 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 KANK2Q63ZY3 851 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 HIST2H2BCQ6DN03 193 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 HSDL2Q6YN16 418 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 DGAT2L6Q6ZPD8 337 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 TICAM1Q8IUC6 712 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 DDIASQ8IXT1 998 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ST13P4Q8IZP2 240 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 CLYBLQ8N0X4 340 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 LGI4Q8N135 537 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 CISD2Q8N5K1 135 aaKnown RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ZNF321PQ8N8H1 164 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 SUN3Q8TAQ9 357 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 CPT1CQ8TCG5 803 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 MGARPQ8TDB4 240 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 C16orf78Q8WTQ4 265 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 KLHL29Q96CT2 875 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 NPAS2Q99743 824 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 UTP23Q9BRU9 249 aaKnown RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 CNPPD1Q9BV87 410 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 RNF32Q9H0A6 362 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 LRTM1Q9HBL6 345 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 PFDN4Q9NQP4 134 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 COPS7AQ9UBW8 275 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ZNF223Q9UK11 482 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 PPIEQ9UNP9 301 aaKnown RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 DLGAP4Q9Y2H0 992 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 TRAF6Q9Y4K3 522 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 POLR3HQ9Y535 204 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ADGRG4Q8IZF6 3080 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 ESPL1Q14674 2120 aa8.59□□□□□ -1.03
HMGN1-202ENST00000380747 AKAP9Q99996 3911 aa8.59□□□□□ -1.04
HMGN1-202ENST00000380747 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 TRAV17A0A0B4J275 112 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 TMEM120BA0PK00 339 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 FCHO1O14526 889 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 BIRC5O15392 142 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 PRKNO60260 465 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 PRAMEF2O60811 474 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SEC22BO75396 215 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SKAP2O75563 359 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 LYPLA1O75608 230 aaPredicted RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 RSL1D1O76021 490 aaKnown RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SERPINE1P05121 402 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 FGF4P08620 206 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 DHRS4L1P0CG22 281 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SLC35E2P0CK97 266 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 CPMP14384 443 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SNRPBP14678 240 aaKnown RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 BGNP21810 368 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ARRB2P32121 409 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 SERPINB5P36952 375 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 FEN1P39748 380 aaKnown RBP8.58□□□□□ -1.04
HMGN1-202ENST00000380747 CD96P40200 585 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 UQCRFS1P47985 274 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 GPR143P51810 404 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 XKP51811 444 aa8.58□□□□□ -1.04
HMGN1-202ENST00000380747 ERVK-8P63133 956 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms