RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 A6NCN8 305 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 SOCS5O75159 536 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 G6PDP11413 515 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 PIGGQ5H8A4 983 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 AKR1C8PQ5T2L2 129 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 FAM198BQ6UWH4 519 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 UGT2A3Q6UWM9 527 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 A0A1B0GV50 99 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 BCAS2O75934 225 aaPredicted RBP11.96□□□□□ -0.49
VPS13A-204ENST00000376634 GALTP07902 379 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 C6P13671 934 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 CDH15P55291 814 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 SUSD1Q6UWL2 747 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 GSG1LQ6UXU4 331 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 NRROSQ86YC3 692 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 OR4K3Q96R72 315 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 BCO2Q9BYV7 579 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 MTG2Q9H4K7 406 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 GTF3C1Q12789 2109 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 LPLP06858 475 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 SHMT2P34897 504 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 ELOCQ15369 112 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 ZC3H14Q6PJT7 736 aaKnown RBP11.96□□□□□ -0.49
VPS13A-204ENST00000376634 NANOS1Q8WY41 292 aaKnown RBP11.96□□□□□ -0.49
VPS13A-204ENST00000376634 PRDM4Q9UKN5 801 aa11.96□□□□□ -0.49
VPS13A-204ENST00000376634 ABHD18Q0P651 414 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 C22orf39Q6P5X5 142 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 OR7G2Q8NG99 324 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 ST6GALNAC4Q9H4F1 302 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 A0A0G2JLL6 359 aaPredicted RBP11.96□□□□□ -0.5
VPS13A-204ENST00000376634 FAM230AA0A1W2PPH8 454 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 ITM2AO43736 263 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 DIRAS1O95057 198 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 OXSR1O95747 527 aaPredicted RBP11.96□□□□□ -0.5
VPS13A-204ENST00000376634 AKR1C4P17516 323 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 RORAP35398 523 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 DCST2Q5T1A1 773 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 PRRT2Q7Z6L0 340 aaPredicted RBP11.96□□□□□ -0.5
VPS13A-204ENST00000376634 TICAM1Q8IUC6 712 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 P2RY13Q9BPV8 354 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 ARL6Q9H0F7 186 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 SLC34A2O95436 690 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 CSF2P04141 144 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 OR12D1P0DN82 309 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 AK4P27144 223 aaPredicted RBP11.96□□□□□ -0.5
VPS13A-204ENST00000376634 SOX2P48431 317 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 EMX2Q04743 252 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 ERMP1Q7Z2K6 904 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 KIAA1191Q96A73 305 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 DDIT4LQ96D03 193 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 CDKN2AIPNLQ96HQ2 116 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 FBXL20Q96IG2 436 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 HINT2Q9BX68 163 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 BIN3Q9NQY0 253 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 RHCGQ9UBD6 479 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 SARDHQ9UL12 918 aa11.96□□□□□ -0.5
VPS13A-204ENST00000376634 J3QRK9 145 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 TGM6O95932 706 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 NAA10P41227 235 aaPredicted RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 UBE2NP61088 152 aaKnown RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 FAM83HQ6ZRV2 1179 aaPredicted RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 OR51D1Q8NGF3 324 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 FBXL8Q96CD0 374 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 PTBP2Q9UKA9 531 aaKnown RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 STMND1H3BQB6 276 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 SCO2O43819 266 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 FBXL22Q6P050 247 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 UBQLNLQ8IYU4 475 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 GPR137CQ8N3F9 429 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 CCDC71LQ8N9Z2 235 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 SPTSSAQ969W0 71 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 VRK1Q99986 396 aaPredicted RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 PRTFDC1Q9NRG1 225 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 SLC7A8Q9UHI5 535 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 NACAE9PAV3 2078 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF43P17038 809 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 OR1E2P47887 323 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 STC1P52823 247 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 CMTM1Q8IZ96 169 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 TRAM1L1Q8N609 369 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 OR4F6Q8NGB9 312 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 BIRC7Q96CA5 298 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 OR51B5Q9H339 312 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 HS3ST4Q9Y661 456 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 AOC1P19801 751 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 HK3P52790 923 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 CDK3Q00526 305 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 DEFB119Q8N690 84 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 ITFG2Q969R8 447 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 KLHDC7BQ96G42 594 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 CAPNS2Q96L46 248 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 GPR34Q9UPC5 381 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 RASAL1O95294 804 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 NUDT7P0C024 238 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 HADHBP55084 474 aaKnown RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 SLC22A10Q63ZE4 541 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 ZDHHC14Q8IZN3 488 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 DAZLQ92904 295 aaKnown RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF559Q9BR84 538 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms