RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 OR2L13Q8N349 312 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 PLPP5Q8NEB5 264 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 OR56A1Q8NGH5 318 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 OR52N2Q8NGI0 321 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 STT3BQ8TCJ2 826 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 CTHRC1Q96CG8 243 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 ELP4Q96EB1 424 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 FAM120BQ96EK7 910 aaKnown RBP16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 VN1R1Q9GZP7 353 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 NECTIN3Q9NQS3 549 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 PTGFRNQ9P2B2 879 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 IFT80Q9P2H3 777 aaPredicted RBP16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 NXT1Q9UKK6 140 aaKnown RBP16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 SATB2Q9UPW6 733 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 KIF26BQ2KJY2 2108 aa16.13■□□□□ 0.17
HLA-DMA-201ENST00000374843 CEP250Q9BV73 2442 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 EVPLLA8MZ36 301 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 FAM220BPB1ANY3 271 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 PLOD3O60568 738 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 PSMG1O95456 288 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 KLK3P07288 261 aaPredicted RBP16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 ZGLP1P0C6A0 271 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 BMP2P12643 396 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 ME2P23368 584 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 MC3RP41968 323 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 CCT3P49368 545 aaKnown RBP16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 PRR5P85299 388 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 OCA2Q04671 838 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 LIPEQ05469 1076 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 STX4Q12846 297 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 FADDQ13158 208 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 NKG7Q16617 165 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 PRICKLE4Q2TBC4 344 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 VWA2Q5GFL6 755 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 C3orf38Q5JPI3 329 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 LCN10Q6JVE6 187 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 BHLHB9Q6PI77 547 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 IGF2-ASQ6U949 168 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 TMEM107Q6UX40 140 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 SERPINA11Q86U17 422 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 HPS6Q86YV9 775 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 GALNT15Q8N3T1 639 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 SPSB2Q99619 263 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 YIPF2Q9BWQ6 316 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 ALOXE3Q9BYJ1 711 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 ALG2Q9H553 416 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 CXorf21Q9HAI6 301 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 GPATCH2Q9NW75 528 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 MAT2BQ9NZL9 334 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 RRP15Q9Y3B9 282 aaKnown RBP16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 SNX8Q9Y5X2 465 aa16.12■□□□□ 0.17
HLA-DMA-201ENST00000374843 C9J4A7 227 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 EMC8O43402 210 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 OR10H2O60403 315 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 CNOT3O75175 753 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 C1QCP02747 245 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 CHI3L1P36222 383 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 TXNL4AP83876 142 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 MAP4K2Q12851 820 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 BNIP2Q12982 314 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 NCF4Q15080 339 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 SPDYE7PQ495Y7 208 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 MINDY4Q4G0A6 757 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 TMEM164Q5U3C3 297 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 TMPRSS7Q7RTY8 843 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 PTRH1Q86Y79 214 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 GALNT12Q8IXK2 581 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 CLEC4FQ8N1N0 589 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 C10orf111Q8N326 155 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 GALNT6Q8NCL4 622 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 FAM13CQ8NE31 585 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 OR7G2Q8NG99 324 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 OR5AK3PQ8NH89 298 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 MIPOL1Q8TD10 442 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 TSLPQ969D9 159 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 RNF31Q96EP0 1072 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 REXO5Q96IC2 774 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 ZNF578Q96N58 590 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 ZNF583Q96ND8 569 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 PTCHD1Q96NR3 888 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 DGAT2Q96PD7 388 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 MS4A4EQ96PG1 132 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 THUMPD3Q9BV44 507 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 MUC13Q9H3R2 512 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 ZCCHC3Q9NUD5 404 aaKnown RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 FOXJ2Q9P0K8 574 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 ZNF639Q9UID6 485 aa16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 C19orf53Q9UNZ5 99 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-201ENST00000374843 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 NT5EP21589 574 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 SDHBP21912 280 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 HTR1EP28566 365 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 PTGER1P34995 402 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 RGNQ15493 299 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 EXOSC6Q5RKV6 272 aaKnown RBP16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 FAM111BQ6SJ93 734 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 C6orf15Q6UXA7 325 aaPredicted RBP16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 DGAT2L6Q6ZPD8 337 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 C6orf120Q7Z4R8 191 aa16.1■□□□□ 0.17
HLA-DMA-201ENST00000374843 VWA5B2Q8N398 1253 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms