RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 LRRC61Q9BV99 259 aa4.21□□□□□ -1.74
PMS1-202ENST00000374826 PHPT1Q9NRX4 125 aaPredicted RBP4.21□□□□□ -1.74
PMS1-202ENST00000374826 HOMER3Q9NSC5 361 aa4.21□□□□□ -1.74
PMS1-202ENST00000374826 HACD3Q9P035 362 aa4.21□□□□□ -1.74
PMS1-202ENST00000374826 APOBEC3BQ9UH17 382 aaKnown RBP4.21□□□□□ -1.74
PMS1-202ENST00000374826 ASIC3Q9UHC3 531 aa4.21□□□□□ -1.74
PMS1-202ENST00000374826 TMEM98Q9Y2Y6 226 aa4.21□□□□□ -1.74
PMS1-202ENST00000374826 PCYT1BQ9Y5K3 369 aaPredicted RBP4.21□□□□□ -1.74
PMS1-202ENST00000374826 PTPRQQ9UMZ3 2332 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 GLYATL1P3A0A0U1RQE8 302 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 SPAARA0A1B0GVQ0 90 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 CPED1A4D0V7 1026 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 OR51F1A6NGY5 319 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 C2orf81A6NN90 581 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ERI2A8K979 691 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 GAPDHSO14556 408 aaPredicted RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 STX7O15400 261 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 FLRT2O43155 660 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 TTI1O43156 1089 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 PSMD3O43242 534 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 AQP9O43315 295 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 DFNA5O60443 496 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A9O60656 530 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 BANF1O75531 89 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 NDUFB4O95168 129 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 PMS2P2O95744 297 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 GAS8O95995 478 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 CSF2P04141 144 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ZNF883P0CG24 379 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 PRSS56P0CW18 603 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 CTSEP14091 401 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 SLC2A4P14672 509 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A6P19224 532 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 TPSB2P20231 275 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A1P22309 533 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A4P22310 534 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 DGKAP23743 735 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A3P35503 534 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A5P35504 534 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 HMGCLP35914 325 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 TRIM23P36406 574 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 PAFAH1B1P43034 410 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 GNPDA1P46926 289 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 RXRGP48443 463 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 NOVA1P51513 510 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 NR1H2P55055 460 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 SRP54P61011 504 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 HNRNPKP61978 463 aaKnown RBP eCLIP4.2□□□□□ -1.74
PMS1-202ENST00000374826 CDH17Q12864 832 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 MSLNQ13421 630 aaPredicted RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 PTK6Q13882 451 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 TAF1AQ15573 450 aaPredicted RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 TPSAB1Q15661 275 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 CHRNA6Q15825 494 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 DEFB133Q30KQ1 61 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ATP13A5Q4VNC0 1218 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ZNF534Q76KX8 674 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 LINC00523Q86TU6 105 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 EXOC3L1Q86VI1 746 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ZC3HC1Q86WB0 502 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 MUC20Q8N307 709 aaPredicted RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 TRAM1L1Q8N609 369 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 EID2Q8N6I1 236 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 PPHLN1Q8NEY8 458 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 OR56A4Q8NGH8 313 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 CCL4L1Q8NHW4 92 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 GDAP1Q8TB36 358 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 BRSK1Q8TDC3 778 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 SAP25Q8TEE9 199 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 GRK7Q8WTQ7 553 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 NAT14Q8WUY8 206 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 SECTM1Q8WVN6 248 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 GLYATL1Q969I3 302 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 TRIM63Q969Q1 353 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ERGIC1Q969X5 290 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ZC3HAV1LQ96H79 300 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 KRT12Q99456 494 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ZSCAN5AQ9BUG6 496 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 OR2AG1Q9H205 316 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 TRABDQ9H4I3 376 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 FAM96AQ9H5X1 160 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 ERVMER34-1Q9H9K5 563 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A7Q9HAW7 530 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A10Q9HAW8 530 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 UGT1A8Q9HAW9 530 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 IL26Q9NPH9 171 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 TCF7L2Q9NQB0 619 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 EIF2B3Q9NR50 452 aaKnown RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 IL17CQ9P0M4 197 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 NFKBIL1Q9UBC1 381 aaPredicted RBP4.2□□□□□ -1.74
PMS1-202ENST00000374826 SLC2A6Q9UGQ3 507 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 PCYOX1Q9UHG3 505 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 CRLS1Q9UJA2 301 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 A3GALT2U3KPV4 340 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 MED13Q9UHV7 2174 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 CACNA1BQ00975 2339 aa4.2□□□□□ -1.74
PMS1-202ENST00000374826 HEATR9A2RTY3 570 aa4.19□□□□□ -1.74
PMS1-202ENST00000374826 CCDC162PA2VCL2 907 aa4.19□□□□□ -1.74
PMS1-202ENST00000374826 RGSL1A5PLK6 1076 aa4.19□□□□□ -1.74
PMS1-202ENST00000374826 OR2AG2A6NM03 316 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms