RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 TM9SF2Q99805 663 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PPCSQ9HAB8 311 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 LIN7BQ9HAP6 207 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 ARMCX1Q9P291 453 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 COPS7AQ9UBW8 275 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 NKX1-2Q9UD57 310 aaPredicted RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 ATP6V1HQ9UI12 483 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PPIL1Q9Y3C6 166 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 TRAF6Q9Y4K3 522 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 TEP1Q99973 2627 aaKnown RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 TMX2-CTNND1H3BSU7 103 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 H3BUI4 141 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PCDH7O60245 1069 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 LRP3O75074 770 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 ADRB1P08588 477 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 NELFEP18615 380 aaKnown RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 XKP51811 444 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 RPS26P62854 115 aaKnown RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 ZNF155Q12901 538 aaPredicted RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 PTGR1Q14914 329 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 EXOSC7Q15024 291 aaKnown RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 PROX2Q3B8N5 592 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 AGKQ53H12 422 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 TNFAIP8L2Q6P589 184 aaPredicted RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 CFAP161Q6P656 301 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 ACAD11Q709F0 780 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 STK32CQ86UX6 486 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 OR8H2Q8N162 312 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 ZNF781Q8N8C0 355 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 OR1N1Q8NGS0 311 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 FANK1Q8TC84 345 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 CIDECQ96AQ7 238 aaPredicted RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 APOPT1Q96IL0 206 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 USB1Q9BQ65 265 aaKnown RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 NCOR1P1Q9H4R4 102 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 RERGLQ9H628 205 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 MRM3Q9HC36 420 aaKnown RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 COPG2Q9UBF2 871 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 TEKT2Q9UIF3 430 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PCDHGA3Q9Y5H0 932 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PTPRDP23468 1912 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 USP9XQ93008 2570 aaPredicted RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 LOC101059948A0A1B0GTJ6 334 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 A0A1B0GTL3 188 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 MKRN2OSH3BPM6 223 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PLOD2O00469 737 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 P2RX6O15547 441 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 SLC28A2O43868 658 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PLIN3O60664 434 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 KERAO60938 352 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 SLCO2B1O94956 709 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PDYNP01213 254 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 ACPPP15309 386 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 KCNJ5P48544 419 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PRIM2P49643 509 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 NR0B1P51843 470 aaKnown RBP6.64□□□□□ -1.35
USP1-202ENST00000371146 CSNK1G2P78368 415 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 RHOUQ7L0Q8 258 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 SLC22A9Q8IVM8 553 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 MREGQ8N565 214 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 AMER3Q8N944 861 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 TRPV3Q8NET8 790 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 OR4D9Q8NGE8 314 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 GPR151Q8TDV0 419 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 STON2Q8WXE9 905 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 UBE2E3Q969T4 207 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 TMEM125Q96AQ2 219 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 P2RY12Q9H244 342 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 P4HTMQ9NXG6 502 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 UTS2RQ9UKP6 389 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 MAP4K5Q9Y4K4 846 aa6.64□□□□□ -1.35
USP1-202ENST00000371146 PCM1Q15154 2024 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 DOCK4Q8N1I0 1966 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 FAM166BA8MTA8 275 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 H7C0S8 307 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 IGLV3-19P01714 112 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 LIFP15018 202 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 GRK2P25098 689 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 MSX2P35548 267 aaPredicted RBP6.63□□□□□ -1.35
USP1-202ENST00000371146 FASLGP48023 281 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 AGFG1P52594 562 aaKnown RBP6.63□□□□□ -1.35
USP1-202ENST00000371146 DGKQP52824 942 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 HERVK_113P63132 956 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 ERVK-8P63133 956 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 AGERQ15109 404 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 EIF2S3LQ2VIR3 472 aaKnown RBP6.63□□□□□ -1.35
USP1-202ENST00000371146 SBSNQ6UWP8 590 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 OLIG3Q7RTU3 272 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 ZNF551Q7Z340 670 aaPredicted RBP6.63□□□□□ -1.35
USP1-202ENST00000371146 TIPARPQ7Z3E1 657 aaKnown RBP6.63□□□□□ -1.35
USP1-202ENST00000371146 TRABD2AQ86V40 505 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 REPS1Q96D71 796 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 WACQ9BTA9 647 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 CCDC106Q9BWC9 280 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 BTBD2Q9BX70 525 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 ERVK-6Q9BXR3 956 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 DERL2Q9GZP9 239 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 RPF2Q9H7B2 306 aaKnown RBP6.63□□□□□ -1.35
USP1-202ENST00000371146 DCLRE1BQ9H816 532 aa6.63□□□□□ -1.35
USP1-202ENST00000371146 NUDT4Q9NZJ9 180 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms