RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ZIC1Q15915 447 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CPTPQ5TA50 214 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 FCRL6Q6DN72 434 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 IKBIPQ70UQ0 350 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 KANSL1Q7Z3B3 1105 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 SLCO6A1Q86UG4 719 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 TSPYL5Q86VY4 417 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 CYP4Z1Q86W10 505 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 TTC29Q8NA56 475 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 MINDY2Q8NBR6 621 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 C16orf78Q8WTQ4 265 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 SPATA9Q9BWV2 254 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 ZNF717Q9BY31 904 aaPredicted RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 ATAD3AQ9NVI7 634 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 FAM120CQ9NX05 1096 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 KIF17Q9P2E2 1029 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 POMT2Q9UKY4 750 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 KLK4Q9Y5K2 254 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 RALGAPA1Q6GYQ0 2036 aa12.45□□□□□ -0.42
SQSTM1-201ENST00000360718 TTC36A6NLP5 189 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 C4orf51C9J302 202 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 RTCAO00442 366 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 CTSVO60911 334 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 MITFO75030 526 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 CFIP05156 583 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ENGP17813 658 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 DDX5P17844 614 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 GPX2P18283 190 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 CDH3P22223 829 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 OPRL1P41146 370 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SSR2P43308 183 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 GSTM5P46439 218 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 DAPP51397 102 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 PSMD7P51665 324 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ARFIP1P53367 373 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 TAS2R50P59544 299 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SNRPNP63162 240 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 KCNC4Q03721 635 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 C2orf80Q0P641 193 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 HYAL2Q12891 473 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 UGT8Q16880 541 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ZNF528Q3MIS6 628 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 TOR1AIP1Q5JTV8 583 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 OR4C11Q6IEV9 310 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 TRIM40Q6P9F5 258 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ZNF621Q6ZSS3 439 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 EIF3MQ7L2H7 374 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 B3GNT8Q7Z7M8 397 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ASPGQ86U10 573 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ZBTB46Q86UZ6 589 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SLC35F3Q8IY50 421 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 C10orf111Q8N326 155 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 OR8J2Q8NGG1 315 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 CEP76Q8TAP6 659 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 BAHD1Q8TBE0 780 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 IPCEF1Q8WWN9 437 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 RERGQ96A58 199 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 KCNC2Q96PR1 638 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ZFYVE21Q9BQ24 234 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SEMA6CQ9H3T2 930 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 REEP4Q9H6H4 257 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 EPS8L2Q9H6S3 715 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 REEP1Q9H902 201 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 LHX9Q9NQ69 397 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 EXD2Q9NVH0 621 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 PDP1Q9P0J1 537 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ERVK-18Q9QC07 812 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 URADA6NGE7 173 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 YKT6O15498 198 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ERI3O43414 337 aaKnown RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 RGS10O43665 173 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SH3BP5O60239 455 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 KCNK5O95279 499 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 B3GALT4O96024 378 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ALPPL2P10696 532 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 BSGP35613 385 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 CAPZBP47756 277 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 EPHA4P54764 986 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 MLLT10P55197 1068 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SLC35A2P78381 396 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 VEZF1Q14119 521 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 HLA-BQ31612 363 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SYT6Q5T7P8 510 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 FBXO42Q6P3S6 717 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 DGLUCYQ7Z3D6 616 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 P2RY8Q86VZ1 359 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 ZNF655Q8N720 491 aaPredicted RBP12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 CAMKVQ8NCB2 501 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 OR2L5Q8NG80 312 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 MS4A6EQ96DS6 147 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 MTERF3Q96E29 417 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 C17orf62Q9BQA9 187 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 DUSP26Q9BV47 211 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SMOC1Q9H4F8 434 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 MIEF1Q9NQG6 463 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 VNN3Q9NY84 501 aa12.44□□□□□ -0.42
SQSTM1-201ENST00000360718 SELENONQ9NZV5 590 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms