RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 UFM1P61960 85 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 SFRP5Q5T4F7 317 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 TAAR8Q969N4 342 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 MSI2Q96DH6 328 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 APOBEC3BQ9UH17 382 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 LSM5Q9Y4Y9 91 aaKnown RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 PCYT1BQ9Y5K3 369 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM265A0A087WTH1 108 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 GKN3PP0CG01 181 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 CRHBPP24387 322 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 ADH6P28332 368 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 NFE2L1Q14494 772 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 C12orf76Q8N812 135 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-201ENST00000356083 OR51Q1Q8NH59 317 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 EFCAB11Q9BUY7 163 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 RXFP3Q9NSD7 469 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 ERVK13-1Q9NX77 482 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 PRODH2Q9UF12 536 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 OR14J1Q9UGF5 321 aa16.54■□□□□ 0.24
COL27A1-201ENST00000356083 PRKACGP22612 351 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 KCTD18Q6PI47 426 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 CEACAM19Q7Z692 300 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 ANKRD66B4E2M5 251 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 CPOXP36551 454 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 GPR4P46093 362 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 MPPED2Q15777 294 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 BEST3Q8N1M1 668 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 PXNP49023 591 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 HES1Q14469 280 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 TRIM61Q5EBN2 209 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 OR4N5Q8IXE1 308 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 KCNK12Q9HB15 430 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 ARVCFO00192 962 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 F8A1P23610 371 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 AQP2P41181 271 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 CRYZQ08257 329 aaKnown RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 HNRNPDQ14103 355 aaKnown RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 TMEM151AQ8N4L1 468 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 CWH43Q9H720 699 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 OR5H2Q8NGV7 314 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 NEIL3Q8TAT5 605 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 RAB2BQ8WUD1 216 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 TOMM40LQ969M1 308 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 OR2M4Q96R27 311 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 RNF38Q9H0F5 515 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 RCCD1A6NED2 376 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 FAM171A2A8MVW0 826 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 PRKXP51817 358 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 RFTN1Q14699 578 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 TRMT10BQ6PF06 316 aaKnown RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 LHFPL3Q86UP9 236 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 OR14K1Q8NGZ2 314 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 MEGF6O75095 1541 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 ZC3H13Q5T200 1668 aaKnown RBP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 MT-CO2P00403 227 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 NR4A2P43354 598 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 CAV2P51636 162 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 RBPJQ06330 500 aa16.53■□□□□ 0.24
COL27A1-201ENST00000356083 FUBP3Q96I24 572 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL27A1-201ENST00000356083 TAP2Q03519 686 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 SORCS1Q8WY21 1168 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 DDX1Q92499 740 aaKnown RBP16.52■□□□□ 0.24
COL27A1-201ENST00000356083 DISP2A7MBM2 1401 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 LILRB3O75022 631 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 CBX7O95931 251 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 MGST1P10620 155 aaKnown RBP16.52■□□□□ 0.24
COL27A1-201ENST00000356083 DEFA4P12838 97 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 GABRR1P24046 479 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 SPRYD7Q5W111 196 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 PRR22Q8IZ63 422 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 OR4F6Q8NGB9 312 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 SLC30A2Q9BRI3 323 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 PLEKHJ1Q9NW61 149 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 VSX1Q9NZR4 365 aaPredicted RBP16.52■□□□□ 0.24
COL27A1-201ENST00000356083 FNIP2Q9P278 1114 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 CRTAPO75718 401 aaPredicted RBP16.52■□□□□ 0.24
COL27A1-201ENST00000356083 PON2Q15165 354 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 C2orf15Q8WU43 125 aaKnown RBP16.52■□□□□ 0.24
COL27A1-201ENST00000356083 ECHDC3Q96DC8 303 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 MRPL38Q96DV4 380 aaKnown RBP16.52■□□□□ 0.24
COL27A1-201ENST00000356083 TXNDC15Q96J42 360 aa16.52■□□□□ 0.24
COL27A1-201ENST00000356083 FAM71F1Q96KD3 344 aaPredicted RBP16.52■□□□□ 0.24
COL27A1-201ENST00000356083 GJE1A6NN92 205 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 TMEM233B4DJY2 109 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 ONECUT3O60422 494 aaPredicted RBP16.52■□□□□ 0.23
COL27A1-201ENST00000356083 CHRM1P11229 460 aaPredicted RBP16.52■□□□□ 0.23
COL27A1-201ENST00000356083 FCRLBQ6BAA4 426 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 ADGRD1Q6QNK2 874 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 OR2AP1Q8NGE2 309 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 SPTSSAQ969W0 71 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 TMEM74Q96NL1 305 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 DOCK7Q96N67 2140 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 FER1L5A0AVI2 2057 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 OAS1P00973 400 aaKnown RBP16.52■□□□□ 0.23
COL27A1-201ENST00000356083 DEFB110Q30KQ9 67 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 PRAMEF8Q5VWM4 474 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 PRAMEF7Q5VXH5 474 aa16.52■□□□□ 0.23
COL27A1-201ENST00000356083 GOLGA7Q7Z5G4 137 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms