RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZNF267Q14586 743 aaPredicted RBP12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 SLC48A1Q6P1K1 146 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 EMBQ6PCB8 327 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 SAMD14Q8IZD0 417 aaPredicted RBP12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 TAGAPQ8N103 731 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 C17orf47Q8NEP4 570 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 OR7G1Q8NGA0 311 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 TP53INP1Q96A56 240 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 GSTO2Q9H4Y5 243 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 EMCNQ9ULC0 261 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 ERVK-19Q9WJR5 959 aa12.34□□□□□ -0.43
SIRPB3P-201ENST00000340424 CAPN14A8MX76 684 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 PGRMC2O15173 223 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 PLIN3O60664 434 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 P04436 131 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 ATP1B1P05026 303 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 CPMP14384 443 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 DRD2P14416 443 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 PORP16435 677 aaPredicted RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 ABOP16442 354 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 KRT4P19013 534 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 CSNK2A2P19784 350 aaPredicted RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 SERPINB3P29508 390 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 XKP51811 444 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 SLC37A1P57057 533 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 FUT7Q11130 342 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 ASPHQ12797 758 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 EBPQ15125 230 aaKnown RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 CFAP157Q5JU67 520 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 PAOXQ6QHF9 649 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 C16orf47Q6ZP98 133 aaPredicted RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 DGAT2L6Q6ZPD8 337 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 FRMD7Q6ZUT3 714 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 SLC22A16Q86VW1 577 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 C1orf52Q8N6N3 182 aaKnown RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 OR2M7Q8NG81 312 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 AGAP11Q8TF27 550 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 CHTF18Q8WVB6 975 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 SPACA9Q96E40 222 aaPredicted RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 FAM173AQ9BQD7 235 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 WWTR1Q9GZV5 400 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 IQCGQ9H095 443 aaKnown RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 TSPAN10Q9H1Z9 355 aaPredicted RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 ACBD3Q9H3P7 528 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 LIN28AQ9H9Z2 209 aaKnown RBP12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 SACM1LQ9NTJ5 587 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 OXSMQ9NWU1 459 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 SIRT5Q9NXA8 310 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 MKS1Q9NXB0 559 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 CFL2Q9Y281 166 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 MAST4O15021 2626 aa12.33□□□□□ -0.44
SIRPB3P-201ENST00000340424 C2orf92A0A1B0GVN3 265 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 A1L4Q6 167 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 SMIM23A6NLE4 172 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 HRKO00198 91 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 CCL21O00585 134 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 PRRG2O14669 202 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZG16O60844 167 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 FBXO45P0C2W1 286 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ESRRAP11474 423 aaPredicted RBP12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 CPA3P15088 417 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 AGAP20933 346 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 CNR1P21554 472 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 TMED10P49755 219 aaKnown RBP12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 GPR85P60893 370 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 VSNL1P62760 191 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 SLC18A2Q05940 514 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ACSM2AQ08AH3 577 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 HEPACAMQ14CZ8 416 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF791Q3KP31 576 aaPredicted RBP12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 RNFT1Q5M7Z0 435 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 LIPMQ5VYY2 423 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 HLA-DQA1Q5Y7H0 255 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ACSM2BQ68CK6 577 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ARHGAP11AQ6P4F7 1023 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 CCDC63Q8NA47 563 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 TM4SF18Q96CE8 201 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ERP27Q96DN0 273 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 METTL2AQ96IZ6 378 aaKnown RBP12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 GAL3ST4Q96RP7 486 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 HBEGFQ99075 208 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 TRMOQ9BU70 441 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ACPTQ9BZG2 426 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ROPN1BQ9BZX4 212 aaPredicted RBP12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ROPN1Q9HAT0 212 aaPredicted RBP12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 MID1IP1Q9NPA3 183 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 MED4Q9NPJ6 270 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 CNIH4Q9P003 139 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 CES1P1Q9UKY3 287 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 ZNF780BQ9Y6R6 833 aa12.32□□□□□ -0.44
SIRPB3P-201ENST00000340424 GNG14A0A1W2PPG7 69 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 WASHC1A8K0Z3 465 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 PCDH7O60245 1069 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 CRCPO75575 148 aa12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 GLSO94925 669 aaPredicted RBP12.31□□□□□ -0.44
SIRPB3P-201ENST00000340424 NADKO95544 446 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms