RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 PCDHGA10Q9Y5H3 936 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 GPC6Q9Y625 555 aaPredicted RBP6.74□□□□□ -1.33
NUP43-201ENST00000340413 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 TO15178 435 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 FMO6PO60774 539 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 SERPINB7O75635 380 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 NKX2-2O95096 273 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 NGFRP08138 427 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 THRBP10828 461 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 TYRP1P17643 537 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 FBLP22087 321 aaKnown RBP6.74□□□□□ -1.33
NUP43-201ENST00000340413 OR4D2P58180 307 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 MGAT2Q10469 447 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 SELPLGQ14242 412 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 ZNF385CQ66K41 422 aaPredicted RBP6.74□□□□□ -1.33
NUP43-201ENST00000340413 RBM44Q6ZP01 1051 aaKnown RBP6.74□□□□□ -1.33
NUP43-201ENST00000340413 NAXDQ8IW45 347 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 CLECL1Q8IZS7 167 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 BMPERQ8N8U9 685 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 OR10A6Q8NH74 314 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 FAM110BQ8TC76 370 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 N4BP2L2Q92802 583 aaPredicted RBP6.74□□□□□ -1.33
NUP43-201ENST00000340413 GIMAP5Q96F15 307 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 VPS50Q96JG6 964 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 DHRS1Q96LJ7 313 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 DOHHQ9BU89 302 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 PINK1Q9BXM7 581 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 HOXD1Q9GZZ0 328 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 SYNPO2LQ9H987 977 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 ADAP2Q9NPF8 381 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 PRTFDC1Q9NRG1 225 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 LANCL2Q9NS86 450 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 PACSIN3Q9UKS6 424 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 RAB26Q9ULW5 256 aa6.74□□□□□ -1.33
NUP43-201ENST00000340413 FAF1Q9UNN5 650 aaPredicted RBP6.74□□□□□ -1.33
NUP43-201ENST00000340413 TRBV23OR9-2A0A075B6M9 112 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 PRAMEF2O60811 474 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ENTPD5O75356 428 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CPSF4O95639 269 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 SERPIND1P05546 499 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CD1EP15812 388 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 PRKAR1BP31321 381 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 XKP51811 444 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CRISP3P54108 245 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ATXN3P54252 364 aaPredicted RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 GFERP55789 205 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SELENOWP63302 87 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 DAB2P98082 770 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CDK6Q00534 326 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 KCNC4Q03721 635 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SCARB2Q14108 478 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 EIPR1Q53HC9 387 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ATAD3BQ5T9A4 648 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 WLSQ5T9L3 541 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 GUSBP11Q6P575 273 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 EID2Q8N6I1 236 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SLC26A7Q8TE54 656 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 GEMIN6Q8WXD5 167 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 FAM162AQ96A26 154 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SLCO4A1Q96BD0 722 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 EPYCQ99645 322 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 KLHL4Q9C0H6 718 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ZNF304Q9HCX3 659 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SLAMF7Q9NQ25 335 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 A0A1W2PQM1 296 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 TMEM150CB9EJG8 249 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SAP18O00422 153 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 RFPL3O75679 317 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 KRT36O76013 467 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CD59P13987 128 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CSRP1P21291 193 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 MTPNP58546 118 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 MRPS22P82650 360 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 MC1RQ01726 317 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ELAVL1Q15717 326 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 PRSS53Q2L4Q9 553 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 PPP4R4Q6NUP7 873 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 MFSD12Q6NUT3 480 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 LAYNQ6UX15 382 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CEACAM20Q6UY09 585 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SPATA24Q86W54 205 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 PLD3Q8IV08 490 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SLC43A2Q8N370 569 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 OR1L3Q8NH93 324 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 CCDC74BQ96LY2 380 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 Q9H521 79 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 IL1RAPQ9NPH3 570 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SLAMF8Q9P0V8 285 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 MRTO4Q9UKD2 239 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 C5orf42Q9H799 3197 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 TCRBV16S1A1N1A0A5B0 115 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 RTCAO00442 366 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 DNAJB5O75953 348 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 IGF2P01344 180 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 PVRP15151 417 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ADH7P40394 386 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms