RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 VASH2Q86V25 355 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 RAB43Q86YS6 212 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 GALNT12Q8IXK2 581 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 OR14A16Q8NHC5 309 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PTPMT1Q8WUK0 201 aaPredicted RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 DAZLQ92904 295 aaKnown RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 CTHRC1Q96CG8 243 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 VPS50Q96JG6 964 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PANX1Q96RD7 426 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 INPP5KQ9BT40 448 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 TUBB6Q9BUF5 446 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 DPH1Q9BZG8 443 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 TRIM4Q9C037 500 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 SIRT3Q9NTG7 399 aaPredicted RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 MAT2BQ9NZL9 334 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 MRPS18BQ9Y676 258 aaKnown RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 A0A087WV62 115 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 C17orf105B2RV13 164 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 SOCS6O14544 535 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 RFXANKO14593 260 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 MRASO14807 208 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 DYRK3O43781 588 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PLOD3O60568 738 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ERN1O75460 977 aaKnown RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 CPSF4O95639 269 aaKnown RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 CAPNS1P04632 268 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ZCCHC18P0CG32 403 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 TNNI3P19429 210 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 OTX2P32243 289 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 GPC1P35052 558 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 CDK9P50750 372 aaKnown RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 IL10RAQ13651 578 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 C6orf10Q5SRN2 563 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 LRIF1Q5T3J3 769 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 TMEM64Q6YI46 380 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 VWA5B2Q8N398 1253 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PCYOX1LQ8NBM8 494 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ADCY4Q8NFM4 1077 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ADAMTS17Q8TE56 1095 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 RCN3Q96D15 328 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ELP4Q96EB1 424 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 NSL1Q96IY1 281 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 IP6K3Q96PC2 410 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PHF12Q96QT6 1004 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 LPAR4Q99677 370 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 WDR77Q9BQA1 342 aaPredicted RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PAIP1Q9H074 479 aaKnown RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ZNF700Q9H0M5 742 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 CXorf36Q9H7Y0 433 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PTGFRNQ9P2B2 879 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 MAP10Q9P2G4 905 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ZNF639Q9UID6 485 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 PPIEQ9UNP9 301 aaKnown RBP16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 ERVK-11Q9UQG0 969 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 CLCA3PQ9Y6N3 262 aa16.7■□□□□ 0.26
SDCBP2-201ENST00000339987 MED19A0JLT2 244 aaPredicted RBP16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 SAGE2PA6NJ88 616 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 A8MUA0 341 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 UBOX5O94941 541 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 KCNH1O95259 989 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 CBX6O95503 412 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 NPPAP01160 153 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 ABCB1P08183 1280 aaPredicted RBP16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 CT62P0C5K7 136 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 HOXB9P17482 250 aaPredicted RBP16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 PTPN6P29350 595 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 PTGER1P34995 402 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 SOX18P35713 384 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 CDKN2CP42773 168 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 MNAT1P51948 309 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 PCOLCEQ15113 449 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 FHL5Q5TD97 284 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 PAPD4Q6PIY7 484 aaKnown RBP16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 FAM111BQ6SJ93 734 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 KIRREL2Q6UWL6 708 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 TMEM107Q6UX40 140 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 MORN4Q8NDC4 146 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 OR11G2Q8NGC1 345 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 SFXN5Q8TD22 340 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 KAT2AQ92830 837 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 C8orf44Q96CB5 159 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 FBXL20Q96IG2 436 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 ART5Q96L15 291 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 NPAS2Q99743 824 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 MESP1Q9BRJ9 268 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 EFCAB1Q9HAE3 211 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 NTMQ9P121 344 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 VPS4AQ9UN37 437 aa16.69■□□□□ 0.26
SDCBP2-201ENST00000339987 IGHV1-45A0A0A0MS14 117 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 EBAG9O00559 213 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 DDAH2O95865 285 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 T-ENOLP0DO92 83 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 ESRRAP11474 423 aaPredicted RBP16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 COX6A1P12074 109 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 S1PR1P21453 382 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 CALB2P22676 271 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 MC3RP41968 323 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 EEF1A2Q05639 463 aaKnown RBP16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 FUT7Q11130 342 aa16.68■□□□□ 0.26
SDCBP2-201ENST00000339987 NFYCQ13952 458 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms