RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 STMND1H3BQB6 276 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 TERTO14746 1132 aaKnown RBP20.12■□□□□ 0.81
TPM1-204ENST00000334895 BRINP1O60477 761 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 UMODP07911 640 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 CT62P0C5K7 136 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 SLC6A2P23975 617 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 PSME3P61289 254 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 MRPS35P82673 323 aaKnown RBP20.12■□□□□ 0.81
TPM1-204ENST00000334895 SERTAD2Q14140 314 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 SELPLGQ14242 412 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 NSDHLQ15738 373 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 PRICKLE4Q2TBC4 344 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 TMEM107Q6UX40 140 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 LANCL3Q6ZV70 420 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 ASRGL1Q7L266 308 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 PGAM4Q8N0Y7 254 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 OR5AK3PQ8NH89 298 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 KAT2AQ92830 837 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 ANKRD27Q96NW4 1050 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 BTBD10Q9BSF8 475 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 TMEM121BQ9BXQ6 578 aaPredicted RBP20.12■□□□□ 0.81
TPM1-204ENST00000334895 LRMDAQ9H2I8 198 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 IKZF5Q9H5V7 419 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 ANKRA2Q9H9E1 313 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 MAT2BQ9NZL9 334 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 VPS4AQ9UN37 437 aa20.12■□□□□ 0.81
TPM1-204ENST00000334895 OR10H2O60403 315 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 ANP32DO95626 131 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 HEXBP07686 556 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 TCN2P20062 427 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 NT5EP21589 574 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 CD82P27701 267 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 GPC1P35052 558 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 MC3RP41968 323 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 STAT5AP42229 794 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 EMP2P54851 167 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 RUNDC3AQ59EK9 446 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 NANOGP8Q6NSW7 305 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 FAM111BQ6SJ93 734 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 DEFB107AQ8IZN7 70 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 SIMC1Q8NDZ2 872 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 OR7G2Q8NG99 324 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 ZNF675Q8TD23 568 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 ZFP90Q8TF47 636 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 ELP4Q96EB1 424 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 DGAT2Q96PD7 388 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 CRB3Q9BUF7 120 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 NANOGQ9H9S0 305 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 CXorf21Q9HAI6 301 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.11■□□□□ 0.81
TPM1-204ENST00000334895 PTRH2Q9Y3E5 179 aaKnown RBP20.11■□□□□ 0.81
TPM1-204ENST00000334895 SNX8Q9Y5X2 465 aa20.11■□□□□ 0.81
TPM1-204ENST00000334895 CEP295Q9C0D2 2601 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 ALOX12BO75342 701 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 RAB40ALP0C0E4 278 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 SOAT1P35610 550 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 RABL3Q5HYI8 236 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 FHL5Q5TD97 284 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 FAAH2Q6GMR7 532 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 C16orf89Q6UX73 402 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 DTX1Q86Y01 620 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 KIF2BQ8N4N8 673 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 OR2Y1Q8NGV0 311 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 CTHRC1Q96CG8 243 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 FAM120BQ96EK7 910 aaKnown RBP20.1■□□□□ 0.81
TPM1-204ENST00000334895 HOPXQ9BPY8 73 aaPredicted RBP20.1■□□□□ 0.81
TPM1-204ENST00000334895 CPPED1Q9BRF8 314 aaPredicted RBP20.1■□□□□ 0.81
TPM1-204ENST00000334895 SLC35A5Q9BS91 424 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 EPS8L2Q9H6S3 715 aa20.1■□□□□ 0.81
TPM1-204ENST00000334895 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.1■□□□□ 0.81
TPM1-204ENST00000334895 TRABD2BA6NFA1 517 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 PLOD2O00469 737 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 GYG2O15488 501 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 UQCRC2P22695 453 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 F8A1P23610 371 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 RASSF2P50749 326 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 MTPNP58546 118 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 BIKQ13323 160 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 TRMT12Q53H54 448 aaKnown RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 GPR155Q7Z3F1 870 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 ANKRD37Q7Z713 158 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 PTPMT1Q8WUK0 201 aaPredicted RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 NKD1Q969G9 470 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 RBM18Q96H35 190 aaKnown RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 SEMA3GQ9NS98 782 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 CMTM6Q9NX76 183 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 FRYQ5TBA9 3013 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 RNF103-CHMP3A0A140T963 221 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 LOC101059948A0A1B0GTJ6 334 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 HRKO00198 91 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 IFNA16P05015 189 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 CYC1P08574 325 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 S1PR1P21453 382 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 GALNSP34059 522 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 SLC7A2P52569 658 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 RPS18P62269 152 aaKnown RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 TMEM205Q6UW68 189 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 TMEM64Q6YI46 380 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 ZNF771Q7L3S4 317 aaPredicted RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 GALNT12Q8IXK2 581 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms