RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 YLPM1P49750 1951 aaKnown RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 NPIPA5E9PKD4 350 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 PPP1R2P9O14990 202 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 SHOXO15266 292 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 PKLRP30613 574 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 SLC6A9P48067 706 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 OR12D2P58182 307 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TAS2R39P59534 338 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 LILRA4P59901 499 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 MAL2Q969L2 176 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 ZNF700Q9H0M5 742 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 DZANK1Q9NVP4 752 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 SERTAD3Q9UJW9 196 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 NPIPA1Q9UND3 350 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 NUBP2Q9Y5Y2 271 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 RNF13O43567 381 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 DBIP07108 87 aaKnown RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 GJB1P08034 283 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 CDK6Q00534 326 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 PUM1Q14671 1186 aaKnown RBP eCLIP6.08□□□□□ -1.44
SSH1-202ENST00000326495 TMED4Q7Z7H5 227 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TEX26Q8N6G2 289 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 OR2T4Q8NH00 348 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 IL12RB2Q99665 862 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 C11orf84Q9BUA3 381 aaPredicted RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 RNF32Q9H0A6 362 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 HIPK2Q9H2X6 1198 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 A8MT66 165 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 HHLA1C9JL84 531 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 BCKDHAP12694 445 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 GP1BBP13224 206 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 MMP12P39900 470 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 HNRNPA0Q13151 305 aaKnown RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 C6orf141Q5SZD1 244 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 GTF2H5Q6ZYL4 71 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 GAREM2Q75VX8 874 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TRIM43Q96BQ3 446 aaPredicted RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 MSI2Q96DH6 328 aaKnown RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 SFXN2Q96NB2 322 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 OR51F1A6NGY5 319 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TRAPPC2P0DI81 140 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TRAPPC2BP0DI82 140 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 ZNF41P51814 821 aaPredicted RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 TAS2R46P59540 309 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 INCA1Q0VD86 236 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 CLEC12AQ5QGZ9 265 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TMIGD1Q6UXZ0 262 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 VTCN1Q7Z7D3 282 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 LRRC28Q86X40 367 aaPredicted RBP6.08□□□□□ -1.44
SSH1-202ENST00000326495 PYCR2Q96C36 320 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 PIP5K1AQ99755 562 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TSSK6Q9BXA6 273 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 APMAPQ9HDC9 416 aa6.08□□□□□ -1.44
SSH1-202ENST00000326495 TRAV6A0A075B6T7 132 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 A0A0D9SG52 128 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 TRBC2A0A5B9 178 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 GANABQ14697 944 aaKnown RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 KCNIP4Q6PIL6 250 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 RFPL4BQ6ZWI9 263 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 GPR142Q7Z601 462 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ZMIZ2Q8NF64 920 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 SLC38A3Q99624 504 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 SSX3Q99909 188 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 SLC25A31Q9H0C2 315 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ZNF225Q9UK10 706 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 DNMT3AQ9Y6K1 912 aaPredicted RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 MSI1O43347 362 aaKnown RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 TLX2O43763 284 aaPredicted RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 UCHL1P09936 223 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 PNMTP11086 282 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 CCND3P30281 292 aaPredicted RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 BEST3Q8N1M1 668 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 TMEM174Q8WUU8 243 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ZDHHC12Q96GR4 267 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 PCED1BQ96HM7 432 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 NMUR1Q9HB89 426 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ZCCHC3Q9NUD5 404 aaKnown RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 ABCB8Q9NUT2 735 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 MGAT4CQ9UBM8 478 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 EME2A4GXA9 379 aaPredicted RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 SC5DO75845 299 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 BMP2P12643 396 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 VAMP1P23763 118 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 VGLL4Q14135 290 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 SLC6A19Q695T7 634 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 GSG1LQ6UXU4 331 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 SAMD12Q8N8I0 201 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 DCAF4L2Q8NA75 395 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 FBXL18Q96ME1 805 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ORAI3Q9BRQ5 295 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 SRMSQ9H3Y6 488 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 CD48P09326 243 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ALPIP09923 528 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 CREB1P16220 341 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 RAB4BP61018 213 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 MALLQ13021 153 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 CFAP52Q8N1V2 620 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 MFSD8Q8NHS3 518 aa6.07□□□□□ -1.44
SSH1-202ENST00000326495 ADAD1Q96M93 576 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms