RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PRAMEF33A0A0G2JMD5 474 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 A6NCN8 305 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 ARRDC5A6NEK1 342 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 CLDN24A6NM45 220 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 CLCA1A8K7I4 914 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 PDZK1P1A8MUH7 402 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 J3QRK9 145 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 MAGEB3O15480 346 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 PRAMEF10O60809 474 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 THEGLP0DJG4 465 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 OPRL1P41146 370 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 EIF2B5Q13144 721 aaKnown RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 FZD2Q14332 565 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 RPE65Q16518 533 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 SPDYE7PQ495Y7 208 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 PLK5Q496M5 336 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 DUS1LQ6P1R4 473 aaKnown RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 C11orf74Q86VG3 221 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 NUDT13Q86X67 352 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 NRROSQ86YC3 692 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 TAGAPQ8N103 731 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 MMP21Q8N119 569 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 DNAJC22Q8N4W6 341 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 ANKRD53Q8N9V6 530 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 UTP15Q8TED0 518 aaKnown RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 SLC38A4Q969I6 547 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 ZNF764Q96H86 408 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 SLC6A18Q96N87 628 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 MAPKAP1Q9BPZ7 522 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 RHNO1Q9BSD3 238 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 CUEDC1Q9NWM3 386 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 SCHIP1Q9P0W5 487 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 CCDC88CQ9P219 2028 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 TMEM247A6NEH6 219 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 OR52A4PA6NMU1 304 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 NDUFS4O43181 175 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 RASGRP1O95267 797 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 NADKO95544 446 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 OCM2P0CE71 109 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 OCMP0CE72 109 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 CD36P16671 472 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 AK4P27144 223 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 GSSP48637 474 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 IDH2P48735 452 aaKnown RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 MLLT10P55197 1068 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 CDC42P60953 191 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 VBP1P61758 197 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 TRA2BP62995 288 aaKnown RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 TBCEQ15813 527 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 RGS21Q2M5E4 152 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 PMS2CLQ68D20 193 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 Q6ZPB1 254 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 ZNF554Q86TJ5 538 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 PLD3Q8IV08 490 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 ADGRF3Q8IZF5 1079 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 CCL4L1Q8NHW4 92 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 NDNFQ8TB73 568 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 GPBAR1Q8TDU6 330 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 PROX1Q92786 737 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 KLHDC7BQ96G42 594 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 CAMK1GQ96NX5 476 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 FERD3LQ96RJ6 166 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 NIPSNAP1Q9BPW8 284 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 IMP3Q9NV31 184 aaKnown RBP13.41□□□□□ -0.26
VRK3-201ENST00000316763 RLIMQ9NVW2 624 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 ERGIC3Q9Y282 383 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 HEBP2Q9Y5Z4 205 aa13.41□□□□□ -0.26
VRK3-201ENST00000316763 USP34Q70CQ2 3546 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 A0A1W2PR77 199 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 PRAMEF25A6NGN4 478 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 H7BY64 318 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 J3KTA2 159 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 RTCAO00442 366 aaKnown RBP13.4□□□□□ -0.26
VRK3-201ENST00000316763 OR1F1O43749 312 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 MPZL2O60487 215 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 EML2O95834 649 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 TNFP01375 233 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 CDK1P06493 297 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 TFPTP0C1Z6 253 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 LIMS1P48059 325 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 LSM3P62310 102 aaKnown RBP13.4□□□□□ -0.26
VRK3-201ENST00000316763 ITGADQ13349 1161 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 CYP27C1Q4G0S4 372 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 DCDC5Q6ZRR9 648 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 FAM92BQ6ZTR7 304 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 IGFN1Q86VF2 1251 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 IQCHQ86VS3 1027 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 TTLQ8NG68 377 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 CHPT1Q8WUD6 406 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 RASSF5Q8WWW0 418 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 DNASE2BQ8WZ79 361 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 GGHQ92820 318 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 ZC3H10Q96K80 434 aaKnown RBP13.4□□□□□ -0.26
VRK3-201ENST00000316763 PRAP1Q96NZ9 151 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 ANKHQ9HCJ1 492 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 FKBP14Q9NWM8 211 aa13.4□□□□□ -0.26
VRK3-201ENST00000316763 KLF15Q9UIH9 416 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms