RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 RACK1P63244 317 aaKnown RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 UBE3AQ05086 875 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 GINS1Q14691 196 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ZNF628Q5EBL2 1059 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ZNF730Q6ZMV8 503 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 QSOX2Q6ZRP7 698 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 C6orf120Q7Z4R8 191 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 CAMKK1Q8N5S9 505 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 PLA2G15Q8NCC3 412 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 JPH3Q8WXH2 748 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 C1GALT1C1Q96EU7 318 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 LRIG1Q96JA1 1093 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ZNF582Q96NG8 517 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 ZIC5Q96T25 663 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 P2RX2Q9UBL9 471 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 PCDHGB7Q9Y5F8 929 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 CENPFP49454 3210 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 SCN5AQ14524 2016 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 SLC28A2O43868 658 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 LEFTY1O75610 366 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ELFN1P0C7U0 828 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 GAAP10253 952 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 PRKCAP17252 672 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ETV5P41161 510 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 GIPRP48546 466 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ETV1P50549 477 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ANXA11P50995 505 aaKnown RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 TAP2Q03519 686 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 GPR19Q15760 415 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 PRSS53Q2L4Q9 553 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 TMEM44Q2T9K0 475 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 IER5LQ5T953 404 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 MZT2AQ6P582 158 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 LCTLQ6UWM7 567 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 CFAP206Q8IYR0 622 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ZFAND1Q8TCF1 268 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 SMPDL3AQ92484 453 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 NR4A3Q92570 626 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ZBED6CLQ96FA7 236 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 ZNF514Q96K75 400 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 LRR1Q96L50 414 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
MKS1-201ENST00000313863 ACOXLQ9NUZ1 547 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ING3Q9NXR8 418 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 SH2B3Q9UQQ2 575 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 PLXND1Q9Y4D7 1925 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 PRODHO43272 600 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 PRKYO43930 277 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
MKS1-201ENST00000313863 GPC1P35052 558 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 IFNGR2P38484 337 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 CDK5Q00535 292 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 GPR162Q16538 588 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 TCTN1Q2MV58 587 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 ZNF805Q5CZA5 627 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 PRAMEF13Q5VWM6 474 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 UTS2BQ765I0 119 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 TMEM163Q8TC26 289 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 RBFOX1Q9NWB1 397 aaKnown RBP13.11□□□□□ -0.31
MKS1-201ENST00000313863 OR6C70A6NIJ9 312 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 ANHXE9PGG2 379 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 LRG1P02750 347 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 TP53P04637 393 aaPredicted RBP13.11□□□□□ -0.31
MKS1-201ENST00000313863 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 CD83Q01151 205 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 GNA13Q14344 377 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 SNAPC1Q16533 368 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 MINDY4Q4G0A6 757 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 ZNF658BQ4V348 819 aaPredicted RBP13.11□□□□□ -0.31
MKS1-201ENST00000313863 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 ENTPD8Q5MY95 495 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 PODNL1Q6PEZ8 512 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 PAQR6Q6TCH4 344 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 LRRC56Q8IYG6 542 aaPredicted RBP13.11□□□□□ -0.31
MKS1-201ENST00000313863 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 SLC38A2Q96QD8 506 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 KATNB1Q9BVA0 655 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 TEX12Q9BXU0 123 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 RHBGQ9H310 441 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 ACSS1Q9NUB1 689 aaPredicted RBP13.11□□□□□ -0.31
MKS1-201ENST00000313863 IL36AQ9UHA7 158 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 A4GNTQ9UNA3 340 aa13.11□□□□□ -0.31
MKS1-201ENST00000313863 TRDV1A0A1B0GX56 115 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 HMGN4O00479 90 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 PLA2G10O15496 165 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 CHST10O43529 356 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 CLEC2LP0C7M8 214 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 CHRNB1P11230 501 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 HOXD10P28358 340 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 MMP12P39900 470 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms