RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 OR52B2Q96RD2 323 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 CACNG4Q9UBN1 327 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 ROBO3Q96MS0 1386 aa9.96□□□□□ -0.82
CLIP1-201ENST00000302528 A0A1W2PPW3 197 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 TMEM233B4DJY2 109 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SLC1A7O00341 560 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 RTCAO00442 366 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 GOSR2O14653 212 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 DUSP11O75319 330 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 RGS9O75916 674 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 PGCP20142 388 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 CSNK2A1P68400 391 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 HS3ST5Q8IZT8 346 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 CSNK2A3Q8NEV1 391 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 PAQR5Q9NXK6 330 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SLC17A6Q9P2U8 582 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 RNF11Q9Y3C5 154 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 KNG1P01042 644 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SHMT2P34897 504 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 HABP2Q14520 560 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 KIAA0895LQ68EN5 471 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 RNF111Q6ZNA4 994 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 CCDC116Q8IYX3 515 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 IQCF1Q8N6M8 205 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 TSGA13Q96PP4 275 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 LIN28AQ9H9Z2 209 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 RPS10P5Q9NQ39 176 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 GKN1Q9NS71 199 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SDHAF2Q9NX18 166 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 A0A1W2PP18 115 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 LRRTM2O43300 516 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 PTH2RP49190 550 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF181Q2M3W8 571 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 LRIT3Q3SXY7 679 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 LANCL3Q6ZV70 420 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 PPP1R35Q8TAP8 253 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 TOMM40LQ969M1 308 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 MSI2Q96DH6 328 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SPIN2AQ99865 258 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SPIN2BQ9BPZ2 258 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 IL21RQ9HBE5 538 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 HHATLQ9HCP6 504 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 ACOT7O00154 380 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 GPR25O00155 361 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 FAAHO00519 579 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SCAF4O95104 1147 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 HTR3BO95264 441 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 OXSR1O95747 527 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 TBX18O95935 607 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 CHRNA1P02708 482 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 OR12D1P0DN82 309 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 OR4D2P58180 307 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 RPL26P61254 145 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 CAMK2DQ13557 499 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 ELOCQ15369 112 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SFRP4Q6FHJ7 346 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 CRTC1Q6UUV9 634 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 WDR53Q7Z5U6 358 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 PIM3Q86V86 326 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 OR6C4Q8NGE1 309 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 ARL11Q969Q4 196 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 OR2M4Q96R27 311 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 TSPAN10Q9H1Z9 355 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 APMAPQ9HDC9 416 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 PDE7BQ9NP56 450 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 FAM208AQ9UK61 1670 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 AKAP12Q02952 1782 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 STMND1H3BQB6 276 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 OGDHQ02218 1023 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 C22orf42Q6IC83 251 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 FOXR2Q6PJQ5 311 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 FAM198BQ6UWH4 519 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 COMMD7Q86VX2 200 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 OR4K1Q8NGD4 311 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 SLC2A12Q8TD20 617 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 DAZLQ92904 295 aaKnown RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 HS6ST2Q96MM7 605 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 IKZF4Q9H2S9 585 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 MEPEQ9NQ76 525 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-201ENST00000302528 PLCXD1Q9NUJ7 323 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 GPATCH2Q9NW75 528 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 ERVK13-1Q9NX77 482 aa9.95□□□□□ -0.82
CLIP1-201ENST00000302528 TMEM88BA6NKF7 163 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 VSTM2BA6NLU5 285 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SERPINE2P07093 398 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF182P17025 639 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TSFMP43897 325 aaKnown RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ACTBP60709 375 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ACTG1P63261 375 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SRYQ05066 204 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 MELKQ14680 651 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 NNATQ16517 81 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CTC1Q2NKJ3 1217 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 C14orf28Q4W4Y0 310 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF419Q96HQ0 510 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TXNDC15Q96J42 360 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 OR2B2Q9GZK3 357 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 REEP4Q9H6H4 257 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms