RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 FER1L5A0AVI2 2057 aa17.73■□□□□ 0.43
PDLIM3-202ENST00000284770 MYOCOSA0A1B0GUC4 107 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 CLIC1O00299 241 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 BCAS2O75934 225 aaPredicted RBP17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 ZGLP1P0C6A0 271 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 RHAGQ02094 409 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 SERTAD2Q14140 314 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 MFSD4BQ5TF39 518 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 GALNT6Q8NCL4 622 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 ZFP90Q8TF47 636 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 SLC35A5Q9BS91 424 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 THUMPD3Q9BV44 507 aaKnown RBP17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 SPRY4Q9C004 299 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 B3GNT4Q9C0J1 378 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 TPT1P8Q9HAU6 139 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 NECTIN3Q9NQS3 549 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 PCDHGA8Q9Y5G5 932 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 SCN2AQ99250 2005 aa17.72■□□□□ 0.43
PDLIM3-202ENST00000284770 VSTM2BA6NLU5 285 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 SDHBP21912 280 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 SOAT1P35610 550 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 TRAP1Q12931 704 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 FLOT2Q14254 428 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 FXNQ16595 210 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 NKG7Q16617 165 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 MLIPQ5VWP3 458 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 MRPL14Q6P1L8 145 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 LAPTM4BQ86VI4 370 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 ST13P4Q8IZP2 240 aaPredicted RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 CLEC4FQ8N1N0 589 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 C7orf57Q8NEG2 295 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 MR1Q95460 341 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 RBM18Q96H35 190 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 MKL2Q9ULH7 1088 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 IGKV3D-11A0A0A0MRZ8 115 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 TEX51A0A1B0GUA7 166 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 EVPLLA8MZ36 301 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 OR10H2O60403 315 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 DNAJA2O60884 412 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 TNFSF15O95150 251 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 DLGAP3O95886 979 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 RECKO95980 971 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 PPIBP23284 216 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 PTGER1P34995 402 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 CCT3P49368 545 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 ERFP50548 548 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 LTB4RQ15722 352 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 FAM199XQ6PEV8 388 aaPredicted RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 TMEM107Q6UX40 140 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 TMEM64Q6YI46 380 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 TMPRSS7Q7RTY8 843 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 GPR155Q7Z3F1 870 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 PTRH1Q86Y79 214 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 PRSS58Q8IYP2 241 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 PLPP5Q8NEB5 264 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 ADCY4Q8NFM4 1077 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 OR5AK3PQ8NH89 298 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 JADE3Q92613 823 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 PPWD1Q96BP3 646 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 ELP4Q96EB1 424 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 ZNF583Q96ND8 569 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 VN1R1Q9GZP7 353 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 CHST8Q9H2A9 424 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 KAT8Q9H7Z6 458 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 FOXJ2Q9P0K8 574 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 AP3M1Q9Y2T2 418 aa17.71■□□□□ 0.43
PDLIM3-202ENST00000284770 PLOD2O00469 737 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 SLITRK5O94991 958 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 C1QCP02747 245 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 STT3AP46977 705 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 BNIP2Q12982 314 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 PRICKLE4Q2TBC4 344 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 SPDYE7PQ495Y7 208 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 ZNF628Q5EBL2 1059 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 C6orf15Q6UXA7 325 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 MARCH9Q86YJ5 346 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 FAM120BQ96EK7 910 aaKnown RBP17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 KCTD14Q9BQ13 255 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 ECSITQ9BQ95 431 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 EPS8L2Q9H6S3 715 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 WDR54Q9H977 334 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 POLR1BQ9H9Y6 1135 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 GPN3Q9UHW5 284 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 ACSL6Q9UKU0 697 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 PADI1Q9ULC6 663 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 USP22Q9UPT9 525 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 CEP250Q9BV73 2442 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 KNTC1P50748 2209 aa17.7■□□□□ 0.42
PDLIM3-202ENST00000284770 RNF103-CHMP3A0A140T963 221 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 CNOT3O75175 753 aaKnown RBP17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 PSMG1O95456 288 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 KRT75O95678 551 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 GPX2P18283 190 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 NT5EP21589 574 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 HTR1EP28566 365 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 CHI3L1P36222 383 aaPredicted RBP17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 MC3RP41968 323 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 EFNA3P52797 238 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 NSDHLQ15738 373 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 FAM198BQ6UWH4 519 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms