RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 BCL2L10Q9HD36 194 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 ACER3Q9NUN7 267 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 TRPC4Q9UBN4 977 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 KCND3Q9UK17 655 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 NDRG4Q9ULP0 352 aaKnown RBP15.66■□□□□ 0.1
CCDC40-201ENST00000269318 SLC22A7Q9Y694 548 aa15.66■□□□□ 0.1
CCDC40-201ENST00000269318 TMEM247A6NEH6 219 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 TLR4O00206 839 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 CYP4B1P13584 511 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 CDH2P19022 906 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF10P21506 573 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-201ENST00000269318 FUT4P22083 530 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 EPHA2P29317 976 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 FASLGP48023 281 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 KCNJ5P48544 419 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 MAZP56270 477 aaKnown RBP15.65■□□□□ 0.1
CCDC40-201ENST00000269318 PRR5P85299 388 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 SIM2Q14190 667 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-201ENST00000269318 ELOCQ15369 112 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 LTB4RQ15722 352 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 EXOC3L2Q2M3D2 409 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 PRSS41Q7RTY9 318 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 SPEM1Q8N4L4 309 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 TTC29Q8NA56 475 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-201ENST00000269318 OR52J3Q8NH60 311 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 OTUB1Q96FW1 271 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-201ENST00000269318 C16orf58Q96GQ5 468 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 ZNF607Q96SK3 696 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 NPLQ9BXD5 320 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-201ENST00000269318 GABARAPL3Q9BY60 117 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 LYRM4Q9HD34 91 aa15.65■□□□□ 0.1
CCDC40-201ENST00000269318 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 H3BSA7 217 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 HCRTR1O43613 425 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 EIF2S1P05198 315 aaKnown RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 NR2F1P10589 423 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ST6GAL1P15907 406 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 GSTT1P30711 240 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 MAN2A2P49641 1150 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ANXA11P50995 505 aaKnown RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 IL1RL1Q01638 556 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 MICAQ29983 383 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ZNF773Q6PK81 442 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 LGI4Q8N135 537 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 LRRC25Q8N386 305 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 SLC5A8Q8N695 610 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 CSNK1A1LQ8N752 337 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 OR10G2Q8NGC3 310 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 C1orf216Q8TAB5 229 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 GIMAP5Q96F15 307 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 COL21A1Q96P44 957 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 FEVQ99581 238 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 PITX2Q99697 317 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 PSD2Q9BQI7 771 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 YIPF4Q9BSR8 244 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 FAM60AQ9NP50 221 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 MS4A12Q9NXJ0 267 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 NTMQ9P121 344 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 HSPE1-MOB4S4R3N1 261 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 SCN3AQ9NY46 2000 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 TDRD6O60522 2096 aaKnown RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 A8MVJ9 347 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 FFAR1O14842 300 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 SEMA7AO75326 666 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 CHRM4P08173 479 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 AGXTP21549 392 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 PPP2R1BP30154 601 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 OLR1P78380 273 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 SIM1P81133 766 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 RPL6Q02878 288 aaKnown RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 NPRL3Q12980 569 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 CDK5R2Q13319 367 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 Q7L0L9 218 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 SAMD14Q8IZD0 417 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ARL14Q8N4G2 192 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ZNF655Q8N720 491 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 SETD9Q8NE22 299 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 NUP43Q8NFH3 380 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 BBS10Q8TAM1 723 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 RASSF5Q8WWW0 418 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ZNF354BQ96LW1 612 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ADNPQ9H2P0 1102 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ANKRA2Q9H9E1 313 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 C3orf14Q9HBI5 128 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 RLIMQ9NVW2 624 aa15.64■□□□□ 0.09
CCDC40-201ENST00000269318 FAM32AQ9Y421 112 aaKnown RBP15.64■□□□□ 0.09
CCDC40-201ENST00000269318 ZNF860A6NHJ4 632 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 ASNA1O43681 348 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 SERPINB7O75635 380 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 ETS2P15036 469 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 TLX1P31314 330 aaPredicted RBP15.63■□□□□ 0.09
CCDC40-201ENST00000269318 XKP51811 444 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 CRISP3P54108 245 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 GPR153Q6NV75 609 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 ARMC6Q6NXE6 501 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 USP53Q70EK8 1073 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 OLIG3Q7RTU3 272 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 GKN2Q86XP6 184 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 TMEFF1Q8IYR6 380 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 SHISA5Q8N114 240 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms