RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 EMC8O43402 210 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 DYRK3O43781 588 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 B4GALT2O60909 372 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 PRKRAO75569 313 aaKnown RBP12.12□□□□□ -0.47
LSM8-201ENST00000249299 KCNK5O95279 499 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 DLGAP3O95886 979 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 RAB40ALP0C0E4 278 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 ZGLP1P0C6A0 271 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 HTR1EP28566 365 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 GPC1P35052 558 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 CCT3P49368 545 aaKnown RBP12.12□□□□□ -0.47
LSM8-201ENST00000249299 CORO7P57737 925 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 RHAGQ02094 409 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 DMTNQ08495 405 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 RBBP4Q09028 425 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 TRAP1Q12931 704 aaKnown RBP12.12□□□□□ -0.47
LSM8-201ENST00000249299 CAPRIN1Q14444 709 aaKnown RBP12.12□□□□□ -0.47
LSM8-201ENST00000249299 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 C1orf189Q5VU69 101 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 SAXO2Q658L1 398 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 ERICH5Q6P6B1 374 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 TMPRSS7Q7RTY8 843 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 ZNF551Q7Z340 670 aaPredicted RBP12.12□□□□□ -0.47
LSM8-201ENST00000249299 OR2L13Q8N349 312 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 KIF2BQ8N4N8 673 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 METTL25Q8N6Q8 603 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 STT3BQ8TCJ2 826 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 UCN3Q969E3 161 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 ALOXE3Q9BYJ1 711 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 ALG2Q9H553 416 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 CXorf36Q9H7Y0 433 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 POLR1BQ9H9Y6 1135 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 CMTM6Q9NX76 183 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 ADA2Q9NZK5 511 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 PISDQ9UG56 409 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 RAPGEFL1Q9UHV5 662 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 ACSL6Q9UKU0 697 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 PADI1Q9ULC6 663 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 C19orf53Q9UNZ5 99 aaPredicted RBP12.12□□□□□ -0.47
LSM8-201ENST00000249299 CLDN16Q9Y5I7 305 aa12.12□□□□□ -0.47
LSM8-201ENST00000249299 RNF103-CHMP3A0A140T963 221 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 PRORSD1PA6NEY8 169 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 NME4O00746 187 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 OR10H2O60403 315 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 LDB3O75112 727 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 CIB2O75838 187 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 STK17BO94768 372 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 AGR2O95994 175 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 CCNYL3P0C7X3 344 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ITIH1P19827 911 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ETV5P41161 510 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 KCNJ2P63252 427 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 HSPB3Q12988 150 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 TARDBPQ13148 414 aaKnown RBP eCLIP12.11□□□□□ -0.47
LSM8-201ENST00000249299 TRIM25Q14258 630 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 RGNQ15493 299 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 NKG7Q16617 165 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SYT16Q17RD7 645 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 PRICKLE4Q2TBC4 344 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ZNF628Q5EBL2 1059 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 C6orf15Q6UXA7 325 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 CALHM3Q86XJ0 350 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 PTRH1Q86Y79 214 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 SLC30A8Q8IWU4 369 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 DTWD1Q8N5C7 304 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ESX1Q8N693 406 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 METTL27Q8N6F8 245 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 GOLM1Q8NBJ4 401 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 OR7G1Q8NGA0 311 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 UTP4Q969X6 686 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 ASB9Q96DX5 294 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 FAM120BQ96EK7 910 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 REXO5Q96IC2 774 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 ART5Q96L15 291 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 PTCHD1Q96NR3 888 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 DGAT2Q96PD7 388 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SLC39A3Q9BRY0 314 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 YIPF2Q9BWQ6 316 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 TMEM38AQ9H6F2 299 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 CXorf21Q9HAI6 301 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ADAP2Q9NPF8 381 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SLC6A13Q9NSD5 602 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 GIN1Q9NXP7 522 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 ZNF639Q9UID6 485 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 PADI2Q9Y2J8 665 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 DUXAA6NLW8 204 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 FAM220BPB1ANY3 271 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 C9orf172C9J069 976 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 ASNA1O43681 348 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 COQ9O75208 318 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 DXOO77932 396 aaKnown RBP12.11□□□□□ -0.47
LSM8-201ENST00000249299 PSMG1O95456 288 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 RECKO95980 971 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 IGHEP01854 428 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 GSNP06396 782 aa12.11□□□□□ -0.47
LSM8-201ENST00000249299 C8orf89P0DMQ9 161 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms