RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 SMARCA5O60264 1052 aaPredicted RBP26.98■■□□□ 1.91
SCARB2-212ENST00000638663 STARD3NLO95772 234 aa26.98■■□□□ 1.91
SCARB2-212ENST00000638663 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.98■■□□□ 1.91
SCARB2-212ENST00000638663 ARFGEF2Q9Y6D5 1785 aa26.98■■□□□ 1.91
SCARB2-212ENST00000638663 SSH3Q8TE77 659 aa26.97■■□□□ 1.91
SCARB2-212ENST00000638663 UTYO14607 1347 aa26.97■■□□□ 1.91
SCARB2-212ENST00000638663 GCKRQ14397 625 aa26.96■■□□□ 1.91
SCARB2-212ENST00000638663 SRGAP3O43295 1099 aa26.96■■□□□ 1.91
SCARB2-212ENST00000638663 HDAC5Q9UQL6 1122 aa26.96■■□□□ 1.91
SCARB2-212ENST00000638663 AFF2P51816 1311 aa26.95■■□□□ 1.91
SCARB2-212ENST00000638663 POLA2Q14181 598 aa26.95■■□□□ 1.9
SCARB2-212ENST00000638663 C16orf71Q8IYS4 520 aaPredicted RBP26.95■■□□□ 1.9
SCARB2-212ENST00000638663 ZNF330Q9Y3S2 320 aaPredicted RBP26.95■■□□□ 1.9
SCARB2-212ENST00000638663 ATP5J2-PTCD1G3V325 749 aa26.94■■□□□ 1.9
SCARB2-212ENST00000638663 NPM2Q86SE8 214 aaKnown RBP26.94■■□□□ 1.9
SCARB2-212ENST00000638663 IBTKQ9P2D0 1353 aaPredicted RBP26.94■■□□□ 1.9
SCARB2-212ENST00000638663 SUCLG2Q96I99 432 aa26.94■■□□□ 1.9
SCARB2-212ENST00000638663 CYP19A1P11511 503 aaPredicted RBP26.93■■□□□ 1.9
SCARB2-212ENST00000638663 ZBTB3Q9H5J0 574 aa26.93■■□□□ 1.9
SCARB2-212ENST00000638663 KCNQ2O43526 872 aa26.92■■□□□ 1.9
SCARB2-212ENST00000638663 PLEKHM2Q8IWE5 1019 aa26.92■■□□□ 1.9
SCARB2-212ENST00000638663 MTX1Q13505 466 aa26.91■■□□□ 1.9
SCARB2-212ENST00000638663 OTUD7AQ8TE49 926 aaPredicted RBP26.91■■□□□ 1.9
SCARB2-212ENST00000638663 NUP188Q5SRE5 1749 aa26.91■■□□□ 1.9
SCARB2-212ENST00000638663 KAZALD1Q96I82 304 aa26.9■■□□□ 1.9
SCARB2-212ENST00000638663 LRRCC1Q9C099 1032 aa26.9■■□□□ 1.9
SCARB2-212ENST00000638663 AFDNP55196 1824 aaKnown RBP26.9■■□□□ 1.9
SCARB2-212ENST00000638663 GJD4Q96KN9 370 aaPredicted RBP26.9■■□□□ 1.9
SCARB2-212ENST00000638663 SURF6O75683 361 aaKnown RBP26.89■■□□□ 1.9
SCARB2-212ENST00000638663 ANP32AP39687 249 aaKnown RBP26.89■■□□□ 1.9
SCARB2-212ENST00000638663 JARID2Q92833 1246 aaPredicted RBP26.89■■□□□ 1.9
SCARB2-212ENST00000638663 BICC1Q9H694 974 aaKnown RBP26.89■■□□□ 1.9
SCARB2-212ENST00000638663 TJP1Q07157 1748 aa26.89■■□□□ 1.89
SCARB2-212ENST00000638663 BMP2KLQ5H9B9 411 aa26.88■■□□□ 1.89
SCARB2-212ENST00000638663 SEC24BO95487 1268 aa26.88■■□□□ 1.89
SCARB2-212ENST00000638663 THSD7AQ9UPZ6 1657 aa26.88■■□□□ 1.89
SCARB2-212ENST00000638663 ZBTB1Q9Y2K1 713 aa26.87■■□□□ 1.89
SCARB2-212ENST00000638663 A0A087WZG4 1122 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 UBE3BQ7Z3V4 1068 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 ARXQ96QS3 562 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 LOC102724428A0A0B4J2F2 783 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 ATP6V1AP38606 617 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 SIK1P57059 783 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 KIF6Q6ZMV9 814 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 PALLDQ8WX93 1383 aa26.86■■□□□ 1.89
SCARB2-212ENST00000638663 ATRNO75882 1429 aa26.85■■□□□ 1.89
SCARB2-212ENST00000638663 RAB11FIP3O75154 756 aa26.84■■□□□ 1.89
SCARB2-212ENST00000638663 TRPC5Q9UL62 973 aaPredicted RBP26.84■■□□□ 1.89
SCARB2-212ENST00000638663 EPHA10Q5JZY3 1008 aa26.84■■□□□ 1.89
SCARB2-212ENST00000638663 SMARCC1Q92922 1105 aaPredicted RBP26.84■■□□□ 1.89
SCARB2-212ENST00000638663 CWC25Q9NXE8 425 aaPredicted RBP26.84■■□□□ 1.89
SCARB2-212ENST00000638663 GSPT1P15170 499 aaKnown RBP26.82■■□□□ 1.88
SCARB2-212ENST00000638663 TTC22Q5TAA0 569 aa26.82■■□□□ 1.88
SCARB2-212ENST00000638663 CASP7P55210 303 aa26.81■■□□□ 1.88
SCARB2-212ENST00000638663 TCIRG1Q13488 830 aa26.81■■□□□ 1.88
SCARB2-212ENST00000638663 HSP90AB4PQ58FF6 505 aa26.81■■□□□ 1.88
SCARB2-212ENST00000638663 FAM182BQ5T319 152 aa26.81■■□□□ 1.88
SCARB2-212ENST00000638663 CCDC191Q8NCU4 936 aa26.81■■□□□ 1.88
SCARB2-212ENST00000638663 IL1RAPL2Q9NP60 686 aa26.81■■□□□ 1.88
SCARB2-212ENST00000638663 PA2G4Q9UQ80 394 aaKnown RBP26.81■■□□□ 1.88
SCARB2-212ENST00000638663 NOP58Q9Y2X3 529 aaKnown RBP26.81■■□□□ 1.88
SCARB2-212ENST00000638663 MAP3K15Q6ZN16 1313 aa26.81■■□□□ 1.88
SCARB2-212ENST00000638663 ITPK1Q13572 414 aa26.8■■□□□ 1.88
SCARB2-212ENST00000638663 RHPN1Q8TCX5 695 aa26.8■■□□□ 1.88
SCARB2-212ENST00000638663 H7C1W4 665 aa26.8■■□□□ 1.88
SCARB2-212ENST00000638663 OS9Q13438 667 aaPredicted RBP26.8■■□□□ 1.88
SCARB2-212ENST00000638663 IL6STP40189 918 aaPredicted RBP26.79■■□□□ 1.88
SCARB2-212ENST00000638663 PTF1AQ7RTS3 328 aa26.79■■□□□ 1.88
SCARB2-212ENST00000638663 KIF1BPQ96EK5 621 aa26.79■■□□□ 1.88
SCARB2-212ENST00000638663 ISCA1Q9BUE6 129 aa26.79■■□□□ 1.88
SCARB2-212ENST00000638663 CRKLP46109 303 aaKnown RBP26.78■■□□□ 1.88
SCARB2-212ENST00000638663 PDE1AP54750 535 aa26.78■■□□□ 1.88
SCARB2-212ENST00000638663 RTL5Q5HYW3 569 aaPredicted RBP26.78■■□□□ 1.88
SCARB2-212ENST00000638663 INTS5Q6P9B9 1019 aaKnown RBP26.78■■□□□ 1.88
SCARB2-212ENST00000638663 CCDC87Q9NVE4 849 aa26.78■■□□□ 1.88
SCARB2-212ENST00000638663 QTRT2Q9H974 415 aaKnown RBP26.78■■□□□ 1.88
SCARB2-212ENST00000638663 COL15A1P39059 1388 aa26.78■■□□□ 1.88
SCARB2-212ENST00000638663 SALL3Q9BXA9 1300 aa26.77■■□□□ 1.88
SCARB2-212ENST00000638663 ONECUT3O60422 494 aaPredicted RBP26.77■■□□□ 1.88
SCARB2-212ENST00000638663 HLFQ16534 295 aa26.77■■□□□ 1.88
SCARB2-212ENST00000638663 GIGYF2Q6Y7W6 1299 aaKnown RBP26.77■■□□□ 1.88
SCARB2-212ENST00000638663 SEPT12Q8IYM1 358 aa26.77■■□□□ 1.88
SCARB2-212ENST00000638663 OSBPL3Q9H4L5 887 aa26.77■■□□□ 1.88
SCARB2-212ENST00000638663 MX1P20591 662 aa26.76■■□□□ 1.87
SCARB2-212ENST00000638663 RABL6Q3YEC7 729 aaPredicted RBP26.75■■□□□ 1.87
SCARB2-212ENST00000638663 DZIP3Q86Y13 1208 aaKnown RBP26.75■■□□□ 1.87
SCARB2-212ENST00000638663 TBC1D2BQ9UPU7 963 aa26.75■■□□□ 1.87
SCARB2-212ENST00000638663 TSHZ3Q63HK5 1081 aa26.75■■□□□ 1.87
SCARB2-212ENST00000638663 UPF2Q9HAU5 1272 aaKnown RBP26.75■■□□□ 1.87
SCARB2-212ENST00000638663 EIF5P55010 431 aaKnown RBP26.74■■□□□ 1.87
SCARB2-212ENST00000638663 TRIM28Q13263 835 aaKnown RBP26.74■■□□□ 1.87
SCARB2-212ENST00000638663 KLHDC4Q8TBB5 520 aa26.74■■□□□ 1.87
SCARB2-212ENST00000638663 CICQ96RK0 1608 aaPredicted RBP26.74■■□□□ 1.87
SCARB2-212ENST00000638663 NUTM1Q86Y26 1132 aa26.73■■□□□ 1.87
SCARB2-212ENST00000638663 IPO9Q96P70 1041 aaKnown RBP26.73■■□□□ 1.87
SCARB2-212ENST00000638663 MFAP1P55081 439 aaKnown RBP26.73■■□□□ 1.87
SCARB2-212ENST00000638663 G3BP1Q13283 466 aaKnown RBP eCLIP26.73■■□□□ 1.87
SCARB2-212ENST00000638663 ERC1Q8IUD2 1116 aa26.73■■□□□ 1.87
SCARB2-212ENST00000638663 SIL1Q9H173 461 aa26.73■■□□□ 1.87
SCARB2-212ENST00000638663 FOXO4P98177 505 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms