RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SDSP20132 328 aa21.66■■□□□ 1.06
CNOT3-209ENST00000617930 TSHZ3Q63HK5 1081 aa21.66■■□□□ 1.06
CNOT3-209ENST00000617930 TBC1D2Q9BYX2 928 aa21.66■■□□□ 1.06
CNOT3-209ENST00000617930 THSD7AQ9UPZ6 1657 aa21.66■■□□□ 1.06
CNOT3-209ENST00000617930 AFF2P51816 1311 aa21.65■■□□□ 1.06
CNOT3-209ENST00000617930 RBM25P49756 843 aaKnown RBP21.65■■□□□ 1.06
CNOT3-209ENST00000617930 PDE1AP54750 535 aa21.65■■□□□ 1.06
CNOT3-209ENST00000617930 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
CNOT3-209ENST00000617930 PRIM1P49642 420 aaKnown RBP21.65■■□□□ 1.06
CNOT3-209ENST00000617930 OSBPL3Q9H4L5 887 aa21.65■■□□□ 1.06
CNOT3-209ENST00000617930 NBPF26B4DH59 902 aa21.64■■□□□ 1.05
CNOT3-209ENST00000617930 IGKV5-2P06315 115 aa21.64■■□□□ 1.05
CNOT3-209ENST00000617930 NBPF14Q5TI25 921 aa21.64■■□□□ 1.05
CNOT3-209ENST00000617930 NBPF10Q6P3W6 841 aaKnown RBP21.64■■□□□ 1.05
CNOT3-209ENST00000617930 NBPF15Q8N660 670 aa21.64■■□□□ 1.05
CNOT3-209ENST00000617930 KIF2CQ99661 725 aa21.64■■□□□ 1.05
CNOT3-209ENST00000617930 LRRCC1Q9C099 1032 aa21.64■■□□□ 1.05
CNOT3-209ENST00000617930 CDC45O75419 566 aa21.63■■□□□ 1.05
CNOT3-209ENST00000617930 XAGE3Q8WTP9 111 aa21.63■■□□□ 1.05
CNOT3-209ENST00000617930 ACSBG1Q96GR2 724 aa21.63■■□□□ 1.05
CNOT3-209ENST00000617930 KAZALD1Q96I82 304 aa21.63■■□□□ 1.05
CNOT3-209ENST00000617930 ALDH1L1O75891 902 aa21.63■■□□□ 1.05
CNOT3-209ENST00000617930 COPS6Q7L5N1 327 aa21.63■■□□□ 1.05
CNOT3-209ENST00000617930 SRGAP3O43295 1099 aa21.62■■□□□ 1.05
CNOT3-209ENST00000617930 MEX3CQ5U5Q3 659 aaKnown RBP21.62■■□□□ 1.05
CNOT3-209ENST00000617930 SYTL4Q96C24 671 aaPredicted RBP21.62■■□□□ 1.05
CNOT3-209ENST00000617930 LINS1Q8NG48 757 aa21.61■■□□□ 1.05
CNOT3-209ENST00000617930 ATRNO75882 1429 aa21.6■■□□□ 1.05
CNOT3-209ENST00000617930 A1BGP04217 495 aa21.6■■□□□ 1.05
CNOT3-209ENST00000617930 BECN1Q14457 450 aa21.6■■□□□ 1.05
CNOT3-209ENST00000617930 IL1RAPL2Q9NP60 686 aa21.6■■□□□ 1.05
CNOT3-209ENST00000617930 SURF6O75683 361 aaKnown RBP21.6■■□□□ 1.05
CNOT3-209ENST00000617930 UTYO14607 1347 aa21.59■■□□□ 1.05
CNOT3-209ENST00000617930 KCNQ2O43526 872 aa21.59■■□□□ 1.05
CNOT3-209ENST00000617930 MTX1Q13505 466 aa21.59■■□□□ 1.05
CNOT3-209ENST00000617930 GSE1Q14687 1217 aa21.59■■□□□ 1.05
CNOT3-209ENST00000617930 PTF1AQ7RTS3 328 aa21.59■■□□□ 1.05
CNOT3-209ENST00000617930 TJP1Q07157 1748 aa21.59■■□□□ 1.05
CNOT3-209ENST00000617930 DNAJC10Q8IXB1 793 aa21.58■■□□□ 1.05
CNOT3-209ENST00000617930 SUCLG2Q96I99 432 aa21.58■■□□□ 1.05
CNOT3-209ENST00000617930 C9orf78Q9NZ63 289 aaPredicted RBP21.58■■□□□ 1.05
CNOT3-209ENST00000617930 RIC3Q7Z5B4 369 aa21.58■■□□□ 1.04
CNOT3-209ENST00000617930 DDX58O95786 925 aaKnown RBP21.57■■□□□ 1.04
CNOT3-209ENST00000617930 FAM182BQ5T319 152 aa21.57■■□□□ 1.04
CNOT3-209ENST00000617930 GJD4Q96KN9 370 aaPredicted RBP21.57■■□□□ 1.04
CNOT3-209ENST00000617930 GRM8O00222 908 aa21.56■■□□□ 1.04
CNOT3-209ENST00000617930 MX1P20591 662 aa21.56■■□□□ 1.04
CNOT3-209ENST00000617930 RHPN1Q8TCX5 695 aa21.56■■□□□ 1.04
CNOT3-209ENST00000617930 STAP2Q9UGK3 403 aa21.56■■□□□ 1.04
CNOT3-209ENST00000617930 ARFGEF2Q9Y6D5 1785 aa21.56■■□□□ 1.04
CNOT3-209ENST00000617930 NEURL1BA8MQ27 555 aa21.56■■□□□ 1.04
CNOT3-209ENST00000617930 RBM42Q9BTD8 480 aaKnown RBP21.56■■□□□ 1.04
CNOT3-209ENST00000617930 METTL22Q9BUU2 404 aaPredicted RBP21.56■■□□□ 1.04
CNOT3-209ENST00000617930 ANTXR1Q9H6X2 564 aa21.56■■□□□ 1.04
CNOT3-209ENST00000617930 ANKRD13DQ6ZTN6 518 aa21.55■■□□□ 1.04
CNOT3-209ENST00000617930 NUTM1Q86Y26 1132 aa21.55■■□□□ 1.04
CNOT3-209ENST00000617930 MYD88Q99836 296 aa21.55■■□□□ 1.04
CNOT3-209ENST00000617930 PA2G4Q9UQ80 394 aaKnown RBP21.55■■□□□ 1.04
CNOT3-209ENST00000617930 RAB11FIP3O75154 756 aa21.54■■□□□ 1.04
CNOT3-209ENST00000617930 TTLL7Q6ZT98 887 aa21.54■■□□□ 1.04
CNOT3-209ENST00000617930 BICC1Q9H694 974 aaKnown RBP21.54■■□□□ 1.04
CNOT3-209ENST00000617930 NUP188Q5SRE5 1749 aa21.54■■□□□ 1.04
CNOT3-209ENST00000617930 FRAT2O75474 233 aaPredicted RBP21.53■■□□□ 1.04
CNOT3-209ENST00000617930 GCKRQ14397 625 aa21.53■■□□□ 1.04
CNOT3-209ENST00000617930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.53■■□□□ 1.04
CNOT3-209ENST00000617930 A0A0G2JS52 829 aa21.53■■□□□ 1.04
CNOT3-209ENST00000617930 EPHA10Q5JZY3 1008 aa21.53■■□□□ 1.04
CNOT3-209ENST00000617930 JARID2Q92833 1246 aaPredicted RBP21.53■■□□□ 1.04
CNOT3-209ENST00000617930 USP26Q9BXU7 913 aa21.53■■□□□ 1.04
CNOT3-209ENST00000617930 CD2BP2O95400 341 aaKnown RBP21.52■■□□□ 1.04
CNOT3-209ENST00000617930 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
CNOT3-209ENST00000617930 SLKQ9H2G2 1235 aaPredicted RBP21.52■■□□□ 1.04
CNOT3-209ENST00000617930 ERBB4Q15303 1308 aa21.51■■□□□ 1.03
CNOT3-209ENST00000617930 TUBGCP6Q96RT7 1819 aa21.51■■□□□ 1.03
CNOT3-209ENST00000617930 ONECUT3O60422 494 aaPredicted RBP21.5■■□□□ 1.03
CNOT3-209ENST00000617930 SPRYD3Q8NCJ5 442 aa21.5■■□□□ 1.03
CNOT3-209ENST00000617930 KIF1BPQ96EK5 621 aa21.5■■□□□ 1.03
CNOT3-209ENST00000617930 CYP19A1P11511 503 aaPredicted RBP21.5■■□□□ 1.03
CNOT3-209ENST00000617930 PI4K2BQ8TCG2 481 aa21.5■■□□□ 1.03
CNOT3-209ENST00000617930 TRPC5Q9UL62 973 aaPredicted RBP21.5■■□□□ 1.03
CNOT3-209ENST00000617930 ATP5J2-PTCD1G3V325 749 aa21.49■■□□□ 1.03
CNOT3-209ENST00000617930 EP400Q96L91 3159 aa21.48■■□□□ 1.03
CNOT3-209ENST00000617930 QTRT2Q9H974 415 aaKnown RBP21.48■■□□□ 1.03
CNOT3-209ENST00000617930 NEXNQ0ZGT2 675 aa21.48■■□□□ 1.03
CNOT3-209ENST00000617930 SNX21Q969T3 373 aa21.48■■□□□ 1.03
CNOT3-209ENST00000617930 ITPK1Q13572 414 aa21.47■■□□□ 1.03
CNOT3-209ENST00000617930 PLBD2Q8NHP8 589 aa21.47■■□□□ 1.03
CNOT3-209ENST00000617930 ZBTB1Q9Y2K1 713 aa21.47■■□□□ 1.03
CNOT3-209ENST00000617930 AFDNP55196 1824 aaKnown RBP21.47■■□□□ 1.03
CNOT3-209ENST00000617930 SBF2Q86WG5 1849 aa21.47■■□□□ 1.03
CNOT3-209ENST00000617930 SEPT12Q8IYM1 358 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 KLHDC4Q8TBB5 520 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 PALLDQ8WX93 1383 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 MYH14Q7Z406 1995 aaKnown RBP21.46■■□□□ 1.03
CNOT3-209ENST00000617930 CICQ96RK0 1608 aaPredicted RBP21.46■■□□□ 1.03
CNOT3-209ENST00000617930 SASH1O94885 1247 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 CASP7P55210 303 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 IL27Q8NEV9 243 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 IL25Q9H293 177 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 BTAF1O14981 1849 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms