RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 RIPK4P57078 832 aa10.15□□□□□ -0.78
MALAT1-208ENST00000616527 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
MALAT1-208ENST00000616527 MST1RQ04912 1400 aa10.15□□□□□ -0.79
MALAT1-208ENST00000616527 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
MALAT1-208ENST00000616527 FLT4P35916 1363 aa10.14□□□□□ -0.79
MALAT1-208ENST00000616527 MS4A1P11836 297 aa10.14□□□□□ -0.79
MALAT1-208ENST00000616527 USP46P62068 366 aa10.14□□□□□ -0.79
MALAT1-208ENST00000616527 REPIN1Q9BWE0 567 aaKnown RBP10.14□□□□□ -0.79
MALAT1-208ENST00000616527 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
MALAT1-208ENST00000616527 DCCP43146 1447 aa10.14□□□□□ -0.79
MALAT1-208ENST00000616527 RTL1A6NKG5 1358 aa10.14□□□□□ -0.79
MALAT1-208ENST00000616527 MAP2P11137 1827 aaKnown RBP10.13□□□□□ -0.79
MALAT1-208ENST00000616527 EIF4A2Q14240 407 aaKnown RBP10.13□□□□□ -0.79
MALAT1-208ENST00000616527 RRS1Q15050 365 aaKnown RBP10.13□□□□□ -0.79
MALAT1-208ENST00000616527 AMHR2Q16671 573 aa10.13□□□□□ -0.79
MALAT1-208ENST00000616527 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
MALAT1-208ENST00000616527 PMFBP1Q8TBY8 1022 aa10.13□□□□□ -0.79
MALAT1-208ENST00000616527 CRBNQ96SW2 442 aa10.13□□□□□ -0.79
MALAT1-208ENST00000616527 KDRP35968 1356 aa10.13□□□□□ -0.79
MALAT1-208ENST00000616527 MAP3K19Q56UN5 1328 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 FANCIQ9NVI1 1328 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 PPM1GO15355 546 aaPredicted RBP10.12□□□□□ -0.79
MALAT1-208ENST00000616527 PLIN1O60240 522 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 ZNF853P0CG23 659 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 SLC19A1P41440 591 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 LAPTM4AQ15012 233 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 Q3C1V9 767 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 ALDH1L2Q3SY69 923 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 C19orf44Q9H6X5 657 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
MALAT1-208ENST00000616527 FBLN1P23142 703 aa10.11□□□□□ -0.79
MALAT1-208ENST00000616527 GNAI1P63096 354 aa10.11□□□□□ -0.79
MALAT1-208ENST00000616527 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
MALAT1-208ENST00000616527 EMID1Q96A84 441 aaPredicted RBP10.11□□□□□ -0.79
MALAT1-208ENST00000616527 HTATSF1O43719 755 aaKnown RBP10.1□□□□□ -0.79
MALAT1-208ENST00000616527 BCAR3O75815 825 aa10.1□□□□□ -0.79
MALAT1-208ENST00000616527 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
MALAT1-208ENST00000616527 TTLL12Q14166 644 aaPredicted RBP10.1□□□□□ -0.79
MALAT1-208ENST00000616527 KCNH5Q8NCM2 988 aa10.1□□□□□ -0.79
MALAT1-208ENST00000616527 PHACTR3Q96KR7 559 aa10.1□□□□□ -0.79
MALAT1-208ENST00000616527 IGSF1Q8N6C5 1336 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 PIK3C2AO00443 1686 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 TCERG1O14776 1098 aaKnown RBP10.09□□□□□ -0.79
MALAT1-208ENST00000616527 HOXA2O43364 376 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 GFRA3O60609 400 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 HSP90AB2PQ58FF8 381 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 C20orf194Q5TEA3 1177 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 RNF19BQ6ZMZ0 732 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 CENPQQ7L2Z9 268 aaPredicted RBP10.09□□□□□ -0.79
MALAT1-208ENST00000616527 PROSER2Q86WR7 435 aaPredicted RBP10.09□□□□□ -0.79
MALAT1-208ENST00000616527 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 FAM117AQ9C073 453 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 RGPD1P0DJD0 1748 aa10.09□□□□□ -0.79
MALAT1-208ENST00000616527 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
MALAT1-208ENST00000616527 HMOX1P09601 288 aa10.08□□□□□ -0.8
MALAT1-208ENST00000616527 MSS51Q4VC12 460 aa10.08□□□□□ -0.8
MALAT1-208ENST00000616527 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
MALAT1-208ENST00000616527 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
MALAT1-208ENST00000616527 ABTB2Q8N961 1025 aa10.08□□□□□ -0.8
MALAT1-208ENST00000616527 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 C1orf167Q5SNV9 1468 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 IPO8O15397 1037 aaKnown RBP10.07□□□□□ -0.8
MALAT1-208ENST00000616527 HOXC9P31274 260 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 AMPHP49418 695 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 EXOSC9Q06265 439 aaKnown RBP10.07□□□□□ -0.8
MALAT1-208ENST00000616527 SPRYD7Q5W111 196 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 ZKSCAN2Q63HK3 967 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 IP6K1Q92551 441 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 ARHGAP45Q92619 1136 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 USP19O94966 1318 aa10.07□□□□□ -0.8
MALAT1-208ENST00000616527 PSME1Q06323 249 aa10.06□□□□□ -0.8
MALAT1-208ENST00000616527 ESCO1Q5FWF5 840 aa10.06□□□□□ -0.8
MALAT1-208ENST00000616527 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
MALAT1-208ENST00000616527 GIGYF2Q6Y7W6 1299 aaKnown RBP10.06□□□□□ -0.8
MALAT1-208ENST00000616527 GAS2L2Q8NHY3 880 aa10.06□□□□□ -0.8
MALAT1-208ENST00000616527 HLA-CQ95604 372 aa10.06□□□□□ -0.8
MALAT1-208ENST00000616527 BABAM1Q9NWV8 329 aa10.06□□□□□ -0.8
MALAT1-208ENST00000616527 RBM19Q9Y4C8 960 aaKnown RBP10.06□□□□□ -0.8
MALAT1-208ENST00000616527 PHRF1Q9P1Y6 1649 aaKnown RBP10.06□□□□□ -0.8
MALAT1-208ENST00000616527 KIAA0232Q92628 1395 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 PLEKHG2Q9H7P9 1386 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 CHL1O00533 1208 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 NRG2O14511 850 aaPredicted RBP10.05□□□□□ -0.8
MALAT1-208ENST00000616527 Q6ZNB5 142 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 ZNF598Q86UK7 904 aaKnown RBP10.05□□□□□ -0.8
MALAT1-208ENST00000616527 TSR2Q969E8 191 aaKnown RBP10.05□□□□□ -0.8
MALAT1-208ENST00000616527 CLUAP1Q96AJ1 413 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 SLIT3O75094 1523 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 NFAT5O94916 1531 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 RGPD8O14715 1765 aaPredicted RBP10.05□□□□□ -0.8
MALAT1-208ENST00000616527 KIF1AQ12756 1690 aa10.05□□□□□ -0.8
MALAT1-208ENST00000616527 SOS1Q07889 1333 aaPredicted RBP10.05□□□□□ -0.8
MALAT1-208ENST00000616527 TMEM94Q12767 1356 aa10.04□□□□□ -0.8
MALAT1-208ENST00000616527 VAMP4O75379 141 aa10.04□□□□□ -0.8
MALAT1-208ENST00000616527 CANXP27824 592 aaKnown RBP10.04□□□□□ -0.8
MALAT1-208ENST00000616527 ATF7IPQ6VMQ6 1270 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms