RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 GRM8O00222 908 aa23.86■■□□□ 1.41
TUBB4B-202ENST00000604929 SRGAP3O43295 1099 aa23.86■■□□□ 1.41
TUBB4B-202ENST00000604929 VSIG10Q8N0Z9 540 aa23.85■■□□□ 1.41
TUBB4B-202ENST00000604929 PLBD2Q8NHP8 589 aa23.85■■□□□ 1.41
TUBB4B-202ENST00000604929 JARID2Q92833 1246 aaPredicted RBP23.85■■□□□ 1.41
TUBB4B-202ENST00000604929 OTUD7AQ8TE49 926 aaPredicted RBP23.84■■□□□ 1.41
TUBB4B-202ENST00000604929 TEX13AQ9BXU3 409 aaPredicted RBP23.84■■□□□ 1.41
TUBB4B-202ENST00000604929 LAMB4A4D0S4 1761 aa23.84■■□□□ 1.41
TUBB4B-202ENST00000604929 STARD3NLO95772 234 aa23.84■■□□□ 1.41
TUBB4B-202ENST00000604929 GCKRQ14397 625 aa23.84■■□□□ 1.41
TUBB4B-202ENST00000604929 SSH3Q8TE77 659 aa23.84■■□□□ 1.41
TUBB4B-202ENST00000604929 ARXQ96QS3 562 aa23.83■■□□□ 1.41
TUBB4B-202ENST00000604929 ZBTB3Q9H5J0 574 aa23.83■■□□□ 1.41
TUBB4B-202ENST00000604929 ANP32AP39687 249 aaKnown RBP23.83■■□□□ 1.4
TUBB4B-202ENST00000604929 PLEKHM2Q8IWE5 1019 aa23.83■■□□□ 1.4
TUBB4B-202ENST00000604929 KCNQ2O43526 872 aa23.82■■□□□ 1.4
TUBB4B-202ENST00000604929 SUCLG2Q96I99 432 aa23.82■■□□□ 1.4
TUBB4B-202ENST00000604929 SURF6O75683 361 aaKnown RBP23.81■■□□□ 1.4
TUBB4B-202ENST00000604929 KAZALD1Q96I82 304 aa23.81■■□□□ 1.4
TUBB4B-202ENST00000604929 POLA2Q14181 598 aa23.8■■□□□ 1.4
TUBB4B-202ENST00000604929 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
TUBB4B-202ENST00000604929 LRRCC1Q9C099 1032 aa23.79■■□□□ 1.4
TUBB4B-202ENST00000604929 UTYO14607 1347 aa23.79■■□□□ 1.4
TUBB4B-202ENST00000604929 BICC1Q9H694 974 aaKnown RBP23.79■■□□□ 1.4
TUBB4B-202ENST00000604929 HDAC5Q9UQL6 1122 aa23.79■■□□□ 1.4
TUBB4B-202ENST00000604929 CYP19A1P11511 503 aaPredicted RBP23.78■■□□□ 1.4
TUBB4B-202ENST00000604929 A0A087WZG4 1122 aa23.77■■□□□ 1.4
TUBB4B-202ENST00000604929 BMP2KLQ5H9B9 411 aa23.77■■□□□ 1.4
TUBB4B-202ENST00000604929 AFF2P51816 1311 aa23.77■■□□□ 1.4
TUBB4B-202ENST00000604929 IBTKQ9P2D0 1353 aaPredicted RBP23.77■■□□□ 1.4
TUBB4B-202ENST00000604929 RTL5Q5HYW3 569 aaPredicted RBP23.76■■□□□ 1.39
TUBB4B-202ENST00000604929 FAM182BQ5T319 152 aa23.76■■□□□ 1.39
TUBB4B-202ENST00000604929 UBE3BQ7Z3V4 1068 aa23.76■■□□□ 1.39
TUBB4B-202ENST00000604929 IL1RAPL2Q9NP60 686 aa23.76■■□□□ 1.39
TUBB4B-202ENST00000604929 ATP6V1AP38606 617 aa23.75■■□□□ 1.39
TUBB4B-202ENST00000604929 MTX1Q13505 466 aa23.74■■□□□ 1.39
TUBB4B-202ENST00000604929 EPHA10Q5JZY3 1008 aa23.74■■□□□ 1.39
TUBB4B-202ENST00000604929 GJD4Q96KN9 370 aaPredicted RBP23.74■■□□□ 1.39
TUBB4B-202ENST00000604929 PA2G4Q9UQ80 394 aaKnown RBP23.74■■□□□ 1.39
TUBB4B-202ENST00000604929 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
TUBB4B-202ENST00000604929 GSPT1P15170 499 aaKnown RBP23.74■■□□□ 1.39
TUBB4B-202ENST00000604929 ARFGEF2Q9Y6D5 1785 aa23.74■■□□□ 1.39
TUBB4B-202ENST00000604929 MSH5O43196 834 aa23.72■■□□□ 1.39
TUBB4B-202ENST00000604929 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
TUBB4B-202ENST00000604929 SIK1P57059 783 aa23.72■■□□□ 1.39
TUBB4B-202ENST00000604929 OS9Q13438 667 aaPredicted RBP23.72■■□□□ 1.39
TUBB4B-202ENST00000604929 TSHZ3Q63HK5 1081 aa23.72■■□□□ 1.39
TUBB4B-202ENST00000604929 KIF6Q6ZMV9 814 aa23.72■■□□□ 1.39
TUBB4B-202ENST00000604929 PTF1AQ7RTS3 328 aa23.72■■□□□ 1.39
TUBB4B-202ENST00000604929 RAB11FIP3O75154 756 aa23.71■■□□□ 1.39
TUBB4B-202ENST00000604929 TTC22Q5TAA0 569 aa23.71■■□□□ 1.39
TUBB4B-202ENST00000604929 RHPN1Q8TCX5 695 aa23.71■■□□□ 1.39
TUBB4B-202ENST00000604929 CWC25Q9NXE8 425 aaPredicted RBP23.71■■□□□ 1.39
TUBB4B-202ENST00000604929 PDE1AP54750 535 aa23.7■■□□□ 1.38
TUBB4B-202ENST00000604929 IPO9Q96P70 1041 aaKnown RBP23.7■■□□□ 1.38
TUBB4B-202ENST00000604929 KLHDC4Q8TBB5 520 aa23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 AFDNP55196 1824 aaKnown RBP23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 MFAP1P55081 439 aaKnown RBP23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 TCIRG1Q13488 830 aa23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 HLFQ16534 295 aa23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 NUTM1Q86Y26 1132 aa23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 TBC1D2BQ9UPU7 963 aa23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 PALLDQ8WX93 1383 aa23.69■■□□□ 1.38
TUBB4B-202ENST00000604929 H7C1W4 665 aa23.68■■□□□ 1.38
TUBB4B-202ENST00000604929 CASP7P55210 303 aa23.68■■□□□ 1.38
TUBB4B-202ENST00000604929 ITPK1Q13572 414 aa23.68■■□□□ 1.38
TUBB4B-202ENST00000604929 CCDC191Q8NCU4 936 aa23.68■■□□□ 1.38
TUBB4B-202ENST00000604929 KIF1BPQ96EK5 621 aa23.68■■□□□ 1.38
TUBB4B-202ENST00000604929 NOP58Q9Y2X3 529 aaKnown RBP23.68■■□□□ 1.38
TUBB4B-202ENST00000604929 SIL1Q9H173 461 aa23.67■■□□□ 1.38
TUBB4B-202ENST00000604929 KCNQ4P56696 695 aa23.67■■□□□ 1.38
TUBB4B-202ENST00000604929 HSP90AB4PQ58FF6 505 aa23.67■■□□□ 1.38
TUBB4B-202ENST00000604929 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
TUBB4B-202ENST00000604929 TRPC5Q9UL62 973 aaPredicted RBP23.67■■□□□ 1.38
TUBB4B-202ENST00000604929 MX1P20591 662 aa23.66■■□□□ 1.38
TUBB4B-202ENST00000604929 INTS5Q6P9B9 1019 aaKnown RBP23.66■■□□□ 1.38
TUBB4B-202ENST00000604929 QTRT2Q9H974 415 aaKnown RBP23.66■■□□□ 1.38
TUBB4B-202ENST00000604929 MAP3K15Q6ZN16 1313 aa23.66■■□□□ 1.38
TUBB4B-202ENST00000604929 CRKLP46109 303 aaKnown RBP23.66■■□□□ 1.38
TUBB4B-202ENST00000604929 SMARCC1Q92922 1105 aaPredicted RBP23.66■■□□□ 1.38
TUBB4B-202ENST00000604929 ISCA1Q9BUE6 129 aa23.66■■□□□ 1.38
TUBB4B-202ENST00000604929 SDSP20132 328 aa23.65■■□□□ 1.38
TUBB4B-202ENST00000604929 IL6STP40189 918 aaPredicted RBP23.65■■□□□ 1.38
TUBB4B-202ENST00000604929 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
TUBB4B-202ENST00000604929 NUP188Q5SRE5 1749 aa23.65■■□□□ 1.38
TUBB4B-202ENST00000604929 GPTP24298 496 aa23.64■■□□□ 1.38
TUBB4B-202ENST00000604929 GIGYF2Q6Y7W6 1299 aaKnown RBP23.64■■□□□ 1.38
TUBB4B-202ENST00000604929 TBC1D9Q6ZT07 1266 aa23.64■■□□□ 1.38
TUBB4B-202ENST00000604929 DZIP3Q86Y13 1208 aaKnown RBP23.64■■□□□ 1.38
TUBB4B-202ENST00000604929 CCDC87Q9NVE4 849 aa23.64■■□□□ 1.38
TUBB4B-202ENST00000604929 SALL3Q9BXA9 1300 aa23.64■■□□□ 1.38
TUBB4B-202ENST00000604929 G3BP1Q13283 466 aaKnown RBP eCLIP23.64■■□□□ 1.373e-8■■■□□ 18.8
TUBB4B-202ENST00000604929 LMBR1LQ6UX01 489 aa23.64■■□□□ 1.37
TUBB4B-202ENST00000604929 CHMP3Q9Y3E7 222 aa23.64■■□□□ 1.37
TUBB4B-202ENST00000604929 SEPT12Q8IYM1 358 aa23.63■■□□□ 1.37
TUBB4B-202ENST00000604929 TJP1Q07157 1748 aa23.63■■□□□ 1.37
TUBB4B-202ENST00000604929 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.63■■□□□ 1.37
TUBB4B-202ENST00000604929 FOXO4P98177 505 aa23.62■■□□□ 1.37
TUBB4B-202ENST00000604929 RABL6Q3YEC7 729 aaPredicted RBP23.62■■□□□ 1.37
TUBB4B-202ENST00000604929 FAM89AQ96GI7 184 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms