RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 FAM98CQ17RN3 349 aaKnown RBP20.51■□□□□ 0.87
NFIX-210ENST00000588228 PLEKHM2Q8IWE5 1019 aa20.51■□□□□ 0.87
NFIX-210ENST00000588228 USP21Q9UK80 565 aa20.51■□□□□ 0.87
NFIX-210ENST00000588228 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
NFIX-210ENST00000588228 APBB1O00213 710 aa20.49■□□□□ 0.87
NFIX-210ENST00000588228 SMARCA5O60264 1052 aaPredicted RBP20.49■□□□□ 0.87
NFIX-210ENST00000588228 TTLL7Q6ZT98 887 aa20.49■□□□□ 0.87
NFIX-210ENST00000588228 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
NFIX-210ENST00000588228 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.49■□□□□ 0.87
NFIX-210ENST00000588228 RAB11FIP3O75154 756 aa20.48■□□□□ 0.87
NFIX-210ENST00000588228 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
NFIX-210ENST00000588228 ARFGEF2Q9Y6D5 1785 aa20.48■□□□□ 0.87
NFIX-210ENST00000588228 C16orf71Q8IYS4 520 aaPredicted RBP20.48■□□□□ 0.87
NFIX-210ENST00000588228 SLC4A9Q96Q91 983 aa20.48■□□□□ 0.87
NFIX-210ENST00000588228 HSP90AB4PQ58FF6 505 aa20.47■□□□□ 0.87
NFIX-210ENST00000588228 MEX3CQ5U5Q3 659 aaKnown RBP20.47■□□□□ 0.87
NFIX-210ENST00000588228 COL15A1P39059 1388 aa20.46■□□□□ 0.87
NFIX-210ENST00000588228 SURF6O75683 361 aaKnown RBP20.46■□□□□ 0.87
NFIX-210ENST00000588228 CYP19A1P11511 503 aaPredicted RBP20.46■□□□□ 0.87
NFIX-210ENST00000588228 ACSBG1Q96GR2 724 aa20.46■□□□□ 0.87
NFIX-210ENST00000588228 SEC24BO95487 1268 aa20.45■□□□□ 0.86
NFIX-210ENST00000588228 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
NFIX-210ENST00000588228 NOP58Q9Y2X3 529 aaKnown RBP20.45■□□□□ 0.86
NFIX-210ENST00000588228 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
NFIX-210ENST00000588228 TTC22Q5TAA0 569 aa20.45■□□□□ 0.86
NFIX-210ENST00000588228 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
NFIX-210ENST00000588228 OSBPL3Q9H4L5 887 aa20.45■□□□□ 0.86
NFIX-210ENST00000588228 IPO9Q96P70 1041 aaKnown RBP20.44■□□□□ 0.86
NFIX-210ENST00000588228 BICC1Q9H694 974 aaKnown RBP20.44■□□□□ 0.86
NFIX-210ENST00000588228 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
NFIX-210ENST00000588228 NUP188Q5SRE5 1749 aa20.43■□□□□ 0.86
NFIX-210ENST00000588228 GSPT1P15170 499 aaKnown RBP20.43■□□□□ 0.86
NFIX-210ENST00000588228 KIF1BPQ96EK5 621 aa20.43■□□□□ 0.86
NFIX-210ENST00000588228 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
NFIX-210ENST00000588228 A0A087WZG4 1122 aa20.42■□□□□ 0.86
NFIX-210ENST00000588228 A0A0G2JS52 829 aa20.42■□□□□ 0.86
NFIX-210ENST00000588228 KIF6Q6ZMV9 814 aa20.42■□□□□ 0.86
NFIX-210ENST00000588228 SALL3Q9BXA9 1300 aa20.42■□□□□ 0.86
NFIX-210ENST00000588228 CCDC191Q8NCU4 936 aa20.42■□□□□ 0.86
NFIX-210ENST00000588228 SMARCC1Q92922 1105 aaPredicted RBP20.42■□□□□ 0.86
NFIX-210ENST00000588228 BCL11AQ9H165 835 aa20.42■□□□□ 0.86
NFIX-210ENST00000588228 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
NFIX-210ENST00000588228 TJP1Q07157 1748 aa20.41■□□□□ 0.86
NFIX-210ENST00000588228 PDE1AP54750 535 aa20.41■□□□□ 0.86
NFIX-210ENST00000588228 CASP7P55210 303 aa20.41■□□□□ 0.86
NFIX-210ENST00000588228 RHPN1Q8TCX5 695 aa20.41■□□□□ 0.86
NFIX-210ENST00000588228 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
NFIX-210ENST00000588228 AFF2P51816 1311 aa20.41■□□□□ 0.86
NFIX-210ENST00000588228 H7C1W4 665 aa20.4■□□□□ 0.86
NFIX-210ENST00000588228 MYT1Q01538 1121 aa20.4■□□□□ 0.86
NFIX-210ENST00000588228 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
NFIX-210ENST00000588228 GJD4Q96KN9 370 aaPredicted RBP20.4■□□□□ 0.86
NFIX-210ENST00000588228 ZNF330Q9Y3S2 320 aaPredicted RBP20.4■□□□□ 0.86
NFIX-210ENST00000588228 PALLDQ8WX93 1383 aa20.4■□□□□ 0.86
NFIX-210ENST00000588228 LOC102724428A0A0B4J2F2 783 aa20.39■□□□□ 0.86
NFIX-210ENST00000588228 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.86
NFIX-210ENST00000588228 SIK1P57059 783 aa20.39■□□□□ 0.86
NFIX-210ENST00000588228 TCIRG1Q13488 830 aa20.39■□□□□ 0.86
NFIX-210ENST00000588228 DDRGK1Q96HY6 314 aa20.39■□□□□ 0.86
NFIX-210ENST00000588228 ISCA1Q9BUE6 129 aa20.39■□□□□ 0.86
NFIX-210ENST00000588228 ZBTB1Q9Y2K1 713 aa20.39■□□□□ 0.86
NFIX-210ENST00000588228 MAP3K15Q6ZN16 1313 aa20.39■□□□□ 0.85
NFIX-210ENST00000588228 MX1P20591 662 aa20.38■□□□□ 0.85
NFIX-210ENST00000588228 TRIM28Q13263 835 aaKnown RBP20.38■□□□□ 0.85
NFIX-210ENST00000588228 RABL6Q3YEC7 729 aaPredicted RBP20.38■□□□□ 0.85
NFIX-210ENST00000588228 EPHA10Q5JZY3 1008 aa20.38■□□□□ 0.85
NFIX-210ENST00000588228 ERC1Q8IUD2 1116 aa20.38■□□□□ 0.85
NFIX-210ENST00000588228 ATRNO75882 1429 aa20.38■□□□□ 0.85
NFIX-210ENST00000588228 AFDNP55196 1824 aaKnown RBP20.38■□□□□ 0.85
NFIX-210ENST00000588228 CICQ96RK0 1608 aaPredicted RBP20.38■□□□□ 0.85
NFIX-210ENST00000588228 CDC45O75419 566 aa20.38■□□□□ 0.85
NFIX-210ENST00000588228 STAP2Q9UGK3 403 aa20.38■□□□□ 0.85
NFIX-210ENST00000588228 AOX1Q06278 1338 aa20.37■□□□□ 0.85
NFIX-210ENST00000588228 MSH5O43196 834 aa20.37■□□□□ 0.85
NFIX-210ENST00000588228 KCNQ2O43526 872 aa20.37■□□□□ 0.85
NFIX-210ENST00000588228 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
NFIX-210ENST00000588228 OS9Q13438 667 aaPredicted RBP20.37■□□□□ 0.85
NFIX-210ENST00000588228 IL1RAPL2Q9NP60 686 aa20.37■□□□□ 0.85
NFIX-210ENST00000588228 TRPC5Q9UL62 973 aaPredicted RBP20.37■□□□□ 0.85
NFIX-210ENST00000588228 TBC1D32Q96NH3 1257 aa20.36■□□□□ 0.85
NFIX-210ENST00000588228 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
NFIX-210ENST00000588228 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
NFIX-210ENST00000588228 HSP90AB3PQ58FF7 597 aa20.35■□□□□ 0.85
NFIX-210ENST00000588228 GIGYF2Q6Y7W6 1299 aaKnown RBP20.35■□□□□ 0.85
NFIX-210ENST00000588228 TBC1D9Q6ZT07 1266 aa20.35■□□□□ 0.85
NFIX-210ENST00000588228 JARID2Q92833 1246 aaPredicted RBP20.35■□□□□ 0.85
NFIX-210ENST00000588228 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
NFIX-210ENST00000588228 SDSP20132 328 aa20.35■□□□□ 0.85
NFIX-210ENST00000588228 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
NFIX-210ENST00000588228 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
NFIX-210ENST00000588228 ERVV-1B6SEH8 477 aa20.34■□□□□ 0.85
NFIX-210ENST00000588228 G3BP1Q13283 466 aaKnown RBP eCLIP20.34■□□□□ 0.85
NFIX-210ENST00000588228 INTS5Q6P9B9 1019 aaKnown RBP20.34■□□□□ 0.85
NFIX-210ENST00000588228 CRKLP46109 303 aaKnown RBP20.33■□□□□ 0.85
NFIX-210ENST00000588228 EIF5P55010 431 aaKnown RBP20.33■□□□□ 0.85
NFIX-210ENST00000588228 ITPK1Q13572 414 aa20.33■□□□□ 0.85
NFIX-210ENST00000588228 CLASRPQ8N2M8 674 aaKnown RBP20.33■□□□□ 0.85
NFIX-210ENST00000588228 COPRSQ9NQ92 184 aa20.33■□□□□ 0.85
NFIX-210ENST00000588228 RFX5P48382 616 aaPredicted RBP20.32■□□□□ 0.84
NFIX-210ENST00000588228 FOXO4P98177 505 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms