RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
GGA3-213ENST00000582486 PLBD2Q8NHP8 589 aa13.88□□□□□ -0.19
GGA3-213ENST00000582486 LRRCC1Q9C099 1032 aa13.88□□□□□ -0.19
GGA3-213ENST00000582486 UTYO14607 1347 aa13.88□□□□□ -0.19
GGA3-213ENST00000582486 GCKRQ14397 625 aa13.87□□□□□ -0.19
GGA3-213ENST00000582486 DNAJC10Q8IXB1 793 aa13.87□□□□□ -0.19
GGA3-213ENST00000582486 LRP6O75581 1613 aa13.87□□□□□ -0.19
GGA3-213ENST00000582486 SURF6O75683 361 aaKnown RBP13.87□□□□□ -0.19
GGA3-213ENST00000582486 GSPT1P15170 499 aaKnown RBP13.87□□□□□ -0.19
GGA3-213ENST00000582486 MARCH10Q8NA82 808 aaPredicted RBP13.87□□□□□ -0.19
GGA3-213ENST00000582486 SUCLG2Q96I99 432 aa13.87□□□□□ -0.19
GGA3-213ENST00000582486 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
GGA3-213ENST00000582486 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
GGA3-213ENST00000582486 MTX1Q13505 466 aa13.86□□□□□ -0.19
GGA3-213ENST00000582486 KAZALD1Q96I82 304 aa13.86□□□□□ -0.19
GGA3-213ENST00000582486 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
GGA3-213ENST00000582486 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
GGA3-213ENST00000582486 TTC22Q5TAA0 569 aa13.86□□□□□ -0.19
GGA3-213ENST00000582486 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
GGA3-213ENST00000582486 FAM98CQ17RN3 349 aaKnown RBP13.85□□□□□ -0.19
GGA3-213ENST00000582486 ACSBG1Q96GR2 724 aa13.85□□□□□ -0.19
GGA3-213ENST00000582486 BICC1Q9H694 974 aaKnown RBP13.85□□□□□ -0.19
GGA3-213ENST00000582486 UPF2Q9HAU5 1272 aaKnown RBP13.85□□□□□ -0.19
GGA3-213ENST00000582486 A0A0G2JS52 829 aa13.85□□□□□ -0.19
GGA3-213ENST00000582486 STARD3NLO95772 234 aa13.85□□□□□ -0.19
GGA3-213ENST00000582486 VPS72Q15906 364 aa13.85□□□□□ -0.19
GGA3-213ENST00000582486 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
GGA3-213ENST00000582486 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
GGA3-213ENST00000582486 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
GGA3-213ENST00000582486 RAB11FIP3O75154 756 aa13.84□□□□□ -0.19
GGA3-213ENST00000582486 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
GGA3-213ENST00000582486 JARID2Q92833 1246 aaPredicted RBP13.84□□□□□ -0.19
GGA3-213ENST00000582486 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
GGA3-213ENST00000582486 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
GGA3-213ENST00000582486 PDE1AP54750 535 aa13.84□□□□□ -0.19
GGA3-213ENST00000582486 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
GGA3-213ENST00000582486 DOT1LQ8TEK3 1739 aa13.83□□□□□ -0.19
GGA3-213ENST00000582486 SALL3Q9BXA9 1300 aa13.83□□□□□ -0.2
GGA3-213ENST00000582486 HSPA1LP34931 641 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 RHPN1Q8TCX5 695 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 OSBPL3Q9H4L5 887 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 PA2G4Q9UQ80 394 aaKnown RBP13.82□□□□□ -0.2
GGA3-213ENST00000582486 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
GGA3-213ENST00000582486 A0A087WZG4 1122 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 CYP19A1P11511 503 aaPredicted RBP13.82□□□□□ -0.2
GGA3-213ENST00000582486 EPHA10Q5JZY3 1008 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 TSHZ3Q63HK5 1081 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 TBC1D9Q6ZT07 1266 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 USP21Q9UK80 565 aa13.82□□□□□ -0.2
GGA3-213ENST00000582486 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
GGA3-213ENST00000582486 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
GGA3-213ENST00000582486 SDSP20132 328 aa13.81□□□□□ -0.2
GGA3-213ENST00000582486 MX1P20591 662 aa13.81□□□□□ -0.2
GGA3-213ENST00000582486 CDC45O75419 566 aa13.8□□□□□ -0.2
GGA3-213ENST00000582486 OS9Q13438 667 aaPredicted RBP13.8□□□□□ -0.2
GGA3-213ENST00000582486 CASP7P55210 303 aa13.8□□□□□ -0.2
GGA3-213ENST00000582486 NUP188Q5SRE5 1749 aa13.8□□□□□ -0.2
GGA3-213ENST00000582486 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
GGA3-213ENST00000582486 ARXQ96QS3 562 aa13.8□□□□□ -0.2
GGA3-213ENST00000582486 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
GGA3-213ENST00000582486 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
GGA3-213ENST00000582486 KCNQ2O43526 872 aa13.79□□□□□ -0.2
GGA3-213ENST00000582486 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
GGA3-213ENST00000582486 H7C1W4 665 aa13.79□□□□□ -0.2
GGA3-213ENST00000582486 RTL5Q5HYW3 569 aaPredicted RBP13.79□□□□□ -0.2
GGA3-213ENST00000582486 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
GGA3-213ENST00000582486 ERICH6Q7L0X2 663 aa13.79□□□□□ -0.2
GGA3-213ENST00000582486 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
GGA3-213ENST00000582486 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
GGA3-213ENST00000582486 CCDC191Q8NCU4 936 aa13.78□□□□□ -0.2
GGA3-213ENST00000582486 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
GGA3-213ENST00000582486 SLC4A3P48751 1232 aa13.78□□□□□ -0.2
GGA3-213ENST00000582486 TCIRG1Q13488 830 aa13.78□□□□□ -0.2
GGA3-213ENST00000582486 COL15A1P39059 1388 aa13.77□□□□□ -0.21
GGA3-213ENST00000582486 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
GGA3-213ENST00000582486 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.21
GGA3-213ENST00000582486 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
GGA3-213ENST00000582486 SIL1Q9H173 461 aa13.77□□□□□ -0.21
GGA3-213ENST00000582486 LOC102724428A0A0B4J2F2 783 aa13.76□□□□□ -0.21
GGA3-213ENST00000582486 SIK1P57059 783 aa13.76□□□□□ -0.21
GGA3-213ENST00000582486 G3BP1Q13283 466 aaKnown RBP eCLIP13.76□□□□□ -0.21
GGA3-213ENST00000582486 ERC1Q8IUD2 1116 aa13.76□□□□□ -0.21
GGA3-213ENST00000582486 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
GGA3-213ENST00000582486 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
GGA3-213ENST00000582486 SASH1O94885 1247 aa13.76□□□□□ -0.21
GGA3-213ENST00000582486 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
GGA3-213ENST00000582486 TJP1Q07157 1748 aa13.76□□□□□ -0.21
GGA3-213ENST00000582486 RFX5P48382 616 aaPredicted RBP13.75□□□□□ -0.21
GGA3-213ENST00000582486 FOXO4P98177 505 aa13.75□□□□□ -0.21
GGA3-213ENST00000582486 HLFQ16534 295 aa13.75□□□□□ -0.21
GGA3-213ENST00000582486 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
GGA3-213ENST00000582486 IL6STP40189 918 aaPredicted RBP13.75□□□□□ -0.21
GGA3-213ENST00000582486 LMBR1LQ6UX01 489 aa13.75□□□□□ -0.21
GGA3-213ENST00000582486 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
GGA3-213ENST00000582486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.75□□□□□ -0.21
GGA3-213ENST00000582486 PTPN12Q05209 780 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms