RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 IGKV5-2P06315 115 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 TTLL7Q6ZT98 887 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 SLC4A9Q96Q91 983 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 ERBB4Q15303 1308 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 ATP8B2P98198 1209 aa25.15■■□□□ 1.62
SMG8-203ENST00000578922 NEXNQ0ZGT2 675 aa25.15■■□□□ 1.62
SMG8-203ENST00000578922 METTL22Q9BUU2 404 aaPredicted RBP25.15■■□□□ 1.62
SMG8-203ENST00000578922 VSIG10Q8N0Z9 540 aa25.14■■□□□ 1.62
SMG8-203ENST00000578922 KCNQ2O43526 872 aa25.13■■□□□ 1.61
SMG8-203ENST00000578922 SMARCA5O60264 1052 aaPredicted RBP25.13■■□□□ 1.61
SMG8-203ENST00000578922 EXOC6BQ9Y2D4 811 aa25.13■■□□□ 1.61
SMG8-203ENST00000578922 ATP5J2-PTCD1G3V325 749 aa25.12■■□□□ 1.61
SMG8-203ENST00000578922 NEURL1BA8MQ27 555 aa25.12■■□□□ 1.61
SMG8-203ENST00000578922 PLBD2Q8NHP8 589 aa25.12■■□□□ 1.61
SMG8-203ENST00000578922 TEX13AQ9BXU3 409 aaPredicted RBP25.12■■□□□ 1.61
SMG8-203ENST00000578922 STARD3NLO95772 234 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 PPP1R42Q7Z4L9 355 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 ZBTB3Q9H5J0 574 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 GRM8O00222 908 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 FAM182BQ5T319 152 aa25.1■■□□□ 1.61
SMG8-203ENST00000578922 C16orf71Q8IYS4 520 aaPredicted RBP25.1■■□□□ 1.61
SMG8-203ENST00000578922 JARID2Q92833 1246 aaPredicted RBP25.1■■□□□ 1.61
SMG8-203ENST00000578922 ARXQ96QS3 562 aa25.1■■□□□ 1.61
SMG8-203ENST00000578922 SRGAP3O43295 1099 aa25.09■■□□□ 1.61
SMG8-203ENST00000578922 GJD4Q96KN9 370 aaPredicted RBP25.09■■□□□ 1.61
SMG8-203ENST00000578922 GCKRQ14397 625 aa25.08■■□□□ 1.61
SMG8-203ENST00000578922 ARFGEF2Q9Y6D5 1785 aa25.08■■□□□ 1.61
SMG8-203ENST00000578922 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.08■■□□□ 1.61
SMG8-203ENST00000578922 SUCLG2Q96I99 432 aa25.08■■□□□ 1.61
SMG8-203ENST00000578922 CYP19A1P11511 503 aaPredicted RBP25.07■■□□□ 1.6
SMG8-203ENST00000578922 NFKBIBQ15653 356 aa25.07■■□□□ 1.6
SMG8-203ENST00000578922 SSH3Q8TE77 659 aa25.06■■□□□ 1.6
SMG8-203ENST00000578922 OTUD7AQ8TE49 926 aaPredicted RBP25.05■■□□□ 1.6
SMG8-203ENST00000578922 ZBTB1Q9Y2K1 713 aa25.05■■□□□ 1.6
SMG8-203ENST00000578922 SLC4A3P48751 1232 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 PTF1AQ7RTS3 328 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 KAZALD1Q96I82 304 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 UTYO14607 1347 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 ATP6V1AP38606 617 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 POLA2Q14181 598 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 BICC1Q9H694 974 aaKnown RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 TRPC5Q9UL62 973 aaPredicted RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 AFDNP55196 1824 aaKnown RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 PALLDQ8WX93 1383 aa25.03■■□□□ 1.6
SMG8-203ENST00000578922 LOC102724428A0A0B4J2F2 783 aa25.03■■□□□ 1.6
SMG8-203ENST00000578922 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 SIK1P57059 783 aa25.03■■□□□ 1.6
SMG8-203ENST00000578922 UBE3BQ7Z3V4 1068 aa25.02■■□□□ 1.6
SMG8-203ENST00000578922 A0A087WZG4 1122 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 PLEKHM2Q8IWE5 1019 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 THSD7AQ9UPZ6 1657 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 TJP1Q07157 1748 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 KIF6Q6ZMV9 814 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 LRRCC1Q9C099 1032 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 HDAC5Q9UQL6 1122 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 IBTKQ9P2D0 1353 aaPredicted RBP25■■□□□ 1.59
SMG8-203ENST00000578922 SEC24BO95487 1268 aa25■■□□□ 1.59
SMG8-203ENST00000578922 QTRT2Q9H974 415 aaKnown RBP25■■□□□ 1.59
SMG8-203ENST00000578922 NUP188Q5SRE5 1749 aa25■■□□□ 1.59
SMG8-203ENST00000578922 ATRNO75882 1429 aa25■■□□□ 1.59
SMG8-203ENST00000578922 ITPK1Q13572 414 aa24.99■■□□□ 1.59
SMG8-203ENST00000578922 EPHA10Q5JZY3 1008 aa24.99■■□□□ 1.59
SMG8-203ENST00000578922 MTX1Q13505 466 aa24.98■■□□□ 1.59
SMG8-203ENST00000578922 BECN1Q14457 450 aa24.98■■□□□ 1.59
SMG8-203ENST00000578922 SEPT12Q8IYM1 358 aa24.98■■□□□ 1.59
SMG8-203ENST00000578922 PA2G4Q9UQ80 394 aaKnown RBP24.98■■□□□ 1.59
SMG8-203ENST00000578922 KCNQ4P56696 695 aa24.97■■□□□ 1.59
SMG8-203ENST00000578922 GSE1Q14687 1217 aa24.97■■□□□ 1.59
SMG8-203ENST00000578922 IL1RAPL2Q9NP60 686 aa24.97■■□□□ 1.59
SMG8-203ENST00000578922 CWC25Q9NXE8 425 aaPredicted RBP24.97■■□□□ 1.59
SMG8-203ENST00000578922 SMARCC1Q92922 1105 aaPredicted RBP24.97■■□□□ 1.59
SMG8-203ENST00000578922 CRKLP46109 303 aaKnown RBP24.96■■□□□ 1.59
SMG8-203ENST00000578922 UPF2Q9HAU5 1272 aaKnown RBP24.95■■□□□ 1.59
SMG8-203ENST00000578922 TBC1D2BQ9UPU7 963 aa24.95■■□□□ 1.59
SMG8-203ENST00000578922 MAP3K15Q6ZN16 1313 aa24.95■■□□□ 1.58
SMG8-203ENST00000578922 OS9Q13438 667 aaPredicted RBP24.95■■□□□ 1.58
SMG8-203ENST00000578922 HLFQ16534 295 aa24.95■■□□□ 1.58
SMG8-203ENST00000578922 INTS5Q6P9B9 1019 aaKnown RBP24.95■■□□□ 1.58
SMG8-203ENST00000578922 TCIRG1Q13488 830 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 BMP2KLQ5H9B9 411 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 CCDC87Q9NVE4 849 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 TSHZ3Q63HK5 1081 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 GSPT1P15170 499 aaKnown RBP24.93■■□□□ 1.58
SMG8-203ENST00000578922 IL6STP40189 918 aaPredicted RBP24.93■■□□□ 1.58
SMG8-203ENST00000578922 CASP7P55210 303 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 CCDC191Q8NCU4 936 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 ONECUT3O60422 494 aaPredicted RBP24.93■■□□□ 1.58
SMG8-203ENST00000578922 KLHDC4Q8TBB5 520 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 RHPN1Q8TCX5 695 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 H7C1W4 665 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 RAB11FIP3O75154 756 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 GPTP24298 496 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 DZIP3Q86Y13 1208 aaKnown RBP24.92■■□□□ 1.58
SMG8-203ENST00000578922 ISCA1Q9BUE6 129 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 TTC22Q5TAA0 569 aa24.91■■□□□ 1.58
SMG8-203ENST00000578922 GIGYF2Q6Y7W6 1299 aaKnown RBP24.91■■□□□ 1.58
SMG8-203ENST00000578922 SIL1Q9H173 461 aa24.91■■□□□ 1.58
SMG8-203ENST00000578922 NUTM1Q86Y26 1132 aa24.9■■□□□ 1.58
SMG8-203ENST00000578922 KIF1BPQ96EK5 621 aa24.9■■□□□ 1.58
SMG8-203ENST00000578922 PDE1AP54750 535 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms