RNA–Protein interactions for RNA: ENST00000562801.5

GPT2-204, Transcript of glutamic--pyruvic transaminase 2, human

TSL 2

Gene GPT2, Length 2,092 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPT2-204	ENST00000562801	SMARCA5	O60264	1052 aa	Predicted RBP	19.01	■□□□□ 0.63
GPT2-204	ENST00000562801	NEXN	Q0ZGT2	675 aa		19.01	■□□□□ 0.63
GPT2-204	ENST00000562801	PPP1R42	Q7Z4L9	355 aa		19.01	■□□□□ 0.63
GPT2-204	ENST00000562801	SSH3	Q8TE77	659 aa		19.01	■□□□□ 0.63
GPT2-204	ENST00000562801	EXOC6B	Q9Y2D4	811 aa		19.01	■□□□□ 0.63
GPT2-204	ENST00000562801	AFDN	P55196	1824 aa	Known RBP	19	■□□□□ 0.63
GPT2-204	ENST00000562801	POLA2	Q14181	598 aa		19	■□□□□ 0.63
GPT2-204	ENST00000562801	TEX13A	Q9BXU3	409 aa	Predicted RBP	19	■□□□□ 0.63
GPT2-204	ENST00000562801		A0A0G2JS52	829 aa		18.99	■□□□□ 0.63
GPT2-204	ENST00000562801	GCKR	Q14397	625 aa		18.99	■□□□□ 0.63
GPT2-204	ENST00000562801	AFF2	P51816	1311 aa		18.99	■□□□□ 0.63
GPT2-204	ENST00000562801	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.98	■□□□□ 0.63
GPT2-204	ENST00000562801	KAZALD1	Q96I82	304 aa		18.98	■□□□□ 0.63
GPT2-204	ENST00000562801	SUCLG2	Q96I99	432 aa		18.98	■□□□□ 0.63
GPT2-204	ENST00000562801	SRGAP3	O43295	1099 aa		18.97	■□□□□ 0.63
GPT2-204	ENST00000562801	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.97	■□□□□ 0.63
GPT2-204	ENST00000562801	BCL11A	Q9H165	835 aa		18.97	■□□□□ 0.63
GPT2-204	ENST00000562801	ATP5J2-PTCD1	G3V325	749 aa		18.97	■□□□□ 0.63
GPT2-204	ENST00000562801	STARD3NL	O95772	234 aa		18.97	■□□□□ 0.63
GPT2-204	ENST00000562801	CYP19A1	P11511	503 aa	Predicted RBP	18.97	■□□□□ 0.63
GPT2-204	ENST00000562801	PLEKHM2	Q8IWE5	1019 aa		18.97	■□□□□ 0.63
GPT2-204	ENST00000562801	KCNQ2	O43526	872 aa		18.96	■□□□□ 0.63
GPT2-204	ENST00000562801	MTX1	Q13505	466 aa		18.96	■□□□□ 0.63
GPT2-204	ENST00000562801	ZBTB3	Q9H5J0	574 aa		18.96	■□□□□ 0.63
GPT2-204	ENST00000562801	SEC24B	O95487	1268 aa		18.96	■□□□□ 0.63
GPT2-204	ENST00000562801	NPM2	Q86SE8	214 aa	Known RBP	18.96	■□□□□ 0.63
GPT2-204	ENST00000562801	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.96	■□□□□ 0.63
GPT2-204	ENST00000562801	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.95	■□□□□ 0.62
GPT2-204	ENST00000562801	ATRN	O75882	1429 aa		18.95	■□□□□ 0.62
GPT2-204	ENST00000562801	BICC1	Q9H694	974 aa	Known RBP	18.94	■□□□□ 0.62
GPT2-204	ENST00000562801	BMP2KL	Q5H9B9	411 aa		18.94	■□□□□ 0.62
GPT2-204	ENST00000562801	JARID2	Q92833	1246 aa	Predicted RBP	18.94	■□□□□ 0.62
GPT2-204	ENST00000562801	GJD4	Q96KN9	370 aa	Predicted RBP	18.94	■□□□□ 0.62
GPT2-204	ENST00000562801	ZBTB1	Q9Y2K1	713 aa		18.94	■□□□□ 0.62
GPT2-204	ENST00000562801	CIC	Q96RK0	1608 aa	Predicted RBP	18.93	■□□□□ 0.62
GPT2-204	ENST00000562801	LRRCC1	Q9C099	1032 aa		18.93	■□□□□ 0.62
GPT2-204	ENST00000562801	HDAC5	Q9UQL6	1122 aa		18.93	■□□□□ 0.62
GPT2-204	ENST00000562801	PALLD	Q8WX93	1383 aa		18.93	■□□□□ 0.62
GPT2-204	ENST00000562801	SURF6	O75683	361 aa	Known RBP	18.92	■□□□□ 0.62
GPT2-204	ENST00000562801	GSPT1	P15170	499 aa	Known RBP	18.92	■□□□□ 0.62
GPT2-204	ENST00000562801	EPHA10	Q5JZY3	1008 aa		18.92	■□□□□ 0.62
GPT2-204	ENST00000562801	LOC102724428	A0A0B4J2F2	783 aa		18.91	■□□□□ 0.62
GPT2-204	ENST00000562801	CASP7	P55210	303 aa		18.91	■□□□□ 0.62
GPT2-204	ENST00000562801	SIK1	P57059	783 aa		18.91	■□□□□ 0.62
GPT2-204	ENST00000562801	UBE3B	Q7Z3V4	1068 aa		18.91	■□□□□ 0.62
GPT2-204	ENST00000562801		A0A087WZG4	1122 aa		18.91	■□□□□ 0.62
GPT2-204	ENST00000562801	ANP32A	P39687	249 aa	Known RBP	18.91	■□□□□ 0.62
GPT2-204	ENST00000562801	ITPK1	Q13572	414 aa		18.9	■□□□□ 0.62
GPT2-204	ENST00000562801	PTF1A	Q7RTS3	328 aa		18.9	■□□□□ 0.62
GPT2-204	ENST00000562801	RREB1	Q92766	1687 aa		18.9	■□□□□ 0.62
GPT2-204	ENST00000562801	COL15A1	P39059	1388 aa		18.9	■□□□□ 0.62
GPT2-204	ENST00000562801	SALL3	Q9BXA9	1300 aa		18.9	■□□□□ 0.62
GPT2-204	ENST00000562801	ATP6V1A	P38606	617 aa		18.89	■□□□□ 0.62
GPT2-204	ENST00000562801	TTC22	Q5TAA0	569 aa		18.89	■□□□□ 0.62
GPT2-204	ENST00000562801	KIF6	Q6ZMV9	814 aa		18.89	■□□□□ 0.62
GPT2-204	ENST00000562801	TRPC5	Q9UL62	973 aa	Predicted RBP	18.89	■□□□□ 0.62
GPT2-204	ENST00000562801	RAB11FIP3	O75154	756 aa		18.89	■□□□□ 0.61
GPT2-204	ENST00000562801	FAM182B	Q5T319	152 aa		18.89	■□□□□ 0.61
GPT2-204	ENST00000562801	CWC25	Q9NXE8	425 aa	Predicted RBP	18.89	■□□□□ 0.61
GPT2-204	ENST00000562801	PA2G4	Q9UQ80	394 aa	Known RBP	18.89	■□□□□ 0.61
GPT2-204	ENST00000562801	NOP58	Q9Y2X3	529 aa	Known RBP	18.89	■□□□□ 0.61
GPT2-204	ENST00000562801	MAP3K15	Q6ZN16	1313 aa		18.89	■□□□□ 0.61
GPT2-204	ENST00000562801	ISCA1	Q9BUE6	129 aa		18.88	■□□□□ 0.61
GPT2-204	ENST00000562801	IL1RAPL2	Q9NP60	686 aa		18.88	■□□□□ 0.61
GPT2-204	ENST00000562801	NHS	Q6T4R5	1651 aa		18.88	■□□□□ 0.61
GPT2-204	ENST00000562801		H7C1W4	665 aa		18.88	■□□□□ 0.61
GPT2-204	ENST00000562801	TCIRG1	Q13488	830 aa		18.88	■□□□□ 0.61
GPT2-204	ENST00000562801	INTS5	Q6P9B9	1019 aa	Known RBP	18.88	■□□□□ 0.61
GPT2-204	ENST00000562801	RHPN1	Q8TCX5	695 aa		18.88	■□□□□ 0.61
GPT2-204	ENST00000562801	SMARCC1	Q92922	1105 aa	Predicted RBP	18.88	■□□□□ 0.61
GPT2-204	ENST00000562801	CCDC191	Q8NCU4	936 aa		18.87	■□□□□ 0.61
GPT2-204	ENST00000562801	COL5A3	P25940	1745 aa	Predicted RBP	18.87	■□□□□ 0.61
GPT2-204	ENST00000562801	ONECUT3	O60422	494 aa	Predicted RBP	18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	IL6ST	P40189	918 aa	Predicted RBP	18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	CRKL	P46109	303 aa	Known RBP	18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	PDE1A	P54750	535 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	ARX	Q96QS3	562 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	BTAF1	O14981	1849 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	ZNF831	Q5JPB2	1677 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	MYH14	Q7Z406	1995 aa	Known RBP	18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	HLF	Q16534	295 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	RABL6	Q3YEC7	729 aa	Predicted RBP	18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	TSHZ3	Q63HK5	1081 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	KIF1BP	Q96EK5	621 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	OSBPL3	Q9H4L5	887 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	CCDC87	Q9NVE4	849 aa		18.86	■□□□□ 0.61
GPT2-204	ENST00000562801	HSP90AB4P	Q58FF6	505 aa		18.85	■□□□□ 0.61
GPT2-204	ENST00000562801	RTL5	Q5HYW3	569 aa	Predicted RBP	18.85	■□□□□ 0.61
GPT2-204	ENST00000562801	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.85	■□□□□ 0.61
GPT2-204	ENST00000562801	ANKRD36C	Q5JPF3	1778 aa		18.84	■□□□□ 0.61
GPT2-204	ENST00000562801	TUBGCP6	Q96RT7	1819 aa		18.84	■□□□□ 0.61
GPT2-204	ENST00000562801	MSH5	O43196	834 aa		18.84	■□□□□ 0.61
GPT2-204	ENST00000562801	MX1	P20591	662 aa		18.84	■□□□□ 0.61
GPT2-204	ENST00000562801	EIF5	P55010	431 aa	Known RBP	18.84	■□□□□ 0.61
GPT2-204	ENST00000562801	SEPT12	Q8IYM1	358 aa		18.84	■□□□□ 0.61
GPT2-204	ENST00000562801	FOXO4	P98177	505 aa		18.83	■□□□□ 0.61
GPT2-204	ENST00000562801	TRIM28	Q13263	835 aa	Known RBP	18.83	■□□□□ 0.61
GPT2-204	ENST00000562801	OS9	Q13438	667 aa	Predicted RBP	18.83	■□□□□ 0.61
GPT2-204	ENST00000562801	KLHDC4	Q8TBB5	520 aa		18.83	■□□□□ 0.61
GPT2-204	ENST00000562801	QTRT2	Q9H974	415 aa	Known RBP	18.83	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms