RNA–Protein interactions for RNA: ENST00000558816.5

SEMA6D-210, Transcript of semaphorin 6D, humanhuman

TSL 5 BASIC

Gene SEMA6D, Length 4,419 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-210ENST00000558816 LTBP4Q8N2S1 1624 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 SF3A1Q15459 793 aaKnown RBP6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 NACAP1Q9BZK3 213 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 XIRP1Q702N8 1843 aaKnown RBP6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 NFKBIBQ15653 356 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 CHRNA2Q15822 529 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 CCDC47Q96A33 483 aaKnown RBP6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 MYL6BP14649 208 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 IL2RBP14784 551 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 TPM4P67936 248 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 ST5P78524 1137 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 CCDC125Q86Z20 511 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 SLF2Q8IX21 1173 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 SURF6O75683 361 aaKnown RBP6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 GNAI2P04899 355 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 PPP1R42Q7Z4L9 355 aa6.73□□□□□ -1.33
SEMA6D-210ENST00000558816 A0A1B0GUL6 1792 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 OVOS2A0A0G2JMS6 1433 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 ARAP2Q8WZ64 1704 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 NFXL1Q6ZNB6 911 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 LAMA4Q16363 1823 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 IFIT1P09914 478 aaKnown RBP6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 XBP1P17861 261 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 SYAP1Q96A49 352 aaPredicted RBP6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 KDRP35968 1356 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 SAFBQ15424 915 aaKnown RBP eCLIP6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 C16orf71Q8IYS4 520 aaPredicted RBP6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 TRIM35Q9UPQ4 493 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 COG6Q9Y2V7 657 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 STRCQ7RTU9 1775 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 PRR36Q9H6K5 1346 aa6.72□□□□□ -1.33
SEMA6D-210ENST00000558816 CPDO75976 1380 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 IGHDP01880 384 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 RBM25P49756 843 aaKnown RBP6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 RARSP54136 660 aaKnown RBP6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 CAVIN4Q5BKX8 364 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 TTC39AQ5SRH9 613 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 SMC5Q8IY18 1101 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 TBC1D32Q96NH3 1257 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 GBP4Q96PP9 640 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 CDC5LQ99459 802 aaKnown RBP6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 KIF2CQ99661 725 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 ZNF287Q9HBT7 754 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 PHLPP1O60346 1717 aa6.71□□□□□ -1.33
SEMA6D-210ENST00000558816 H3BQV1 296 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 IFFO2Q5TF58 517 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 KIAA0232Q92628 1395 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 VPS72Q15906 364 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 SAMD1Q6SPF0 538 aaPredicted RBP6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 SKAP1Q86WV1 359 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 ZSCAN29Q8IWY8 852 aaPredicted RBP6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 TSR2Q969E8 191 aaKnown RBP6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 HYPKQ9NX55 129 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 AKAP2Q9Y2D5 859 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 ECM29Q5VYK3 1845 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 PCDH11XQ9BZA7 1347 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 PCDH11YQ9BZA8 1340 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 CRB1P82279 1406 aa6.71□□□□□ -1.34
SEMA6D-210ENST00000558816 ATF7IPQ6VMQ6 1270 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 CNTROBQ8N137 903 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 TFCP2L1Q9NZI6 479 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 R3HCC1Q9Y3T6 440 aaKnown RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 HSP90AB2PQ58FF8 381 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 SLKQ9H2G2 1235 aaPredicted RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 QTRT2Q9H974 415 aaKnown RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 ABCC4O15439 1325 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 FSD1Q9BTV5 496 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 DBF4Q9UBU7 674 aaPredicted RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 TRMT112Q9UI30 125 aaKnown RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 AFF2P51816 1311 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 ZNF831Q5JPB2 1677 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 SNRPA1P09661 255 aaKnown RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 FAM196AQ6ZSG2 479 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 BTG4Q9NY30 223 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 RTCBQ9Y3I0 505 aaKnown RBP6.7□□□□□ -1.34
SEMA6D-210ENST00000558816 KIAA1551Q9HCM1 1747 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 SNX21Q969T3 373 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 ANKIB1Q9P2G1 1089 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 PARP3Q9Y6F1 533 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 SALL3Q9BXA9 1300 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 BCAR3O75815 825 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 EIF4A2Q14240 407 aaKnown RBP6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 WWC2Q6AWC2 1192 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 CEP89Q96ST8 783 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 TTLL12Q14166 644 aaPredicted RBP6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 NBPF6Q5VWK0 638 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 NBPF5PQ86XG9 351 aaPredicted RBP6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 ZNF622Q969S3 477 aaKnown RBP eCLIP6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 NBPF4Q96M43 638 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 MAP3K19Q56UN5 1328 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 WDR17Q8IZU2 1322 aa6.69□□□□□ -1.34
SEMA6D-210ENST00000558816 PLCH1Q4KWH8 1693 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms