RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
SMAD3-207ENST00000558763 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
SMAD3-207ENST00000558763 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
SMAD3-207ENST00000558763 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
SMAD3-207ENST00000558763 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
SMAD3-207ENST00000558763 NPM2Q86SE8 214 aaKnown RBP16.15■□□□□ 0.18
SMAD3-207ENST00000558763 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
SMAD3-207ENST00000558763 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
SMAD3-207ENST00000558763 APBA3O96018 575 aa16.14■□□□□ 0.17
SMAD3-207ENST00000558763 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
SMAD3-207ENST00000558763 ITPK1Q13572 414 aa16.14■□□□□ 0.17
SMAD3-207ENST00000558763 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
SMAD3-207ENST00000558763 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
SMAD3-207ENST00000558763 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
SMAD3-207ENST00000558763 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
SMAD3-207ENST00000558763 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
SMAD3-207ENST00000558763 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
SMAD3-207ENST00000558763 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
SMAD3-207ENST00000558763 HMMRO75330 724 aa16.13■□□□□ 0.17
SMAD3-207ENST00000558763 MYL6BP14649 208 aa16.13■□□□□ 0.17
SMAD3-207ENST00000558763 COL5A3P25940 1745 aaPredicted RBP16.12■□□□□ 0.17
SMAD3-207ENST00000558763 ZNF831Q5JPB2 1677 aa16.12■□□□□ 0.17
SMAD3-207ENST00000558763 ALDH1L1O75891 902 aa16.12■□□□□ 0.17
SMAD3-207ENST00000558763 STARD3NLO95772 234 aa16.12■□□□□ 0.17
SMAD3-207ENST00000558763 A1BGP04217 495 aa16.12■□□□□ 0.17
SMAD3-207ENST00000558763 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
SMAD3-207ENST00000558763 PLEKHM2Q8IWE5 1019 aa16.12■□□□□ 0.17
SMAD3-207ENST00000558763 TEX13AQ9BXU3 409 aaPredicted RBP16.12■□□□□ 0.17
SMAD3-207ENST00000558763 CYP19A1P11511 503 aaPredicted RBP16.11■□□□□ 0.17
SMAD3-207ENST00000558763 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
SMAD3-207ENST00000558763 SSH3Q8TE77 659 aa16.11■□□□□ 0.17
SMAD3-207ENST00000558763 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
SMAD3-207ENST00000558763 AFDNP55196 1824 aaKnown RBP16.11■□□□□ 0.17
SMAD3-207ENST00000558763 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
SMAD3-207ENST00000558763 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
SMAD3-207ENST00000558763 POLA2Q14181 598 aa16.11■□□□□ 0.17
SMAD3-207ENST00000558763 CWF19L2Q2TBE0 894 aaKnown RBP16.11■□□□□ 0.17
SMAD3-207ENST00000558763 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
SMAD3-207ENST00000558763 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
SMAD3-207ENST00000558763 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
SMAD3-207ENST00000558763 UTYO14607 1347 aa16.1■□□□□ 0.17
SMAD3-207ENST00000558763 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
SMAD3-207ENST00000558763 AIMP1Q12904 312 aaKnown RBP16.1■□□□□ 0.17
SMAD3-207ENST00000558763 COPS6Q7L5N1 327 aa16.1■□□□□ 0.17
SMAD3-207ENST00000558763 C16orf71Q8IYS4 520 aaPredicted RBP16.1■□□□□ 0.17
SMAD3-207ENST00000558763 LINC00116Q8NCU8 138 aa16.1■□□□□ 0.17
SMAD3-207ENST00000558763 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
SMAD3-207ENST00000558763 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
SMAD3-207ENST00000558763 ZNF330Q9Y3S2 320 aaPredicted RBP16.09■□□□□ 0.17
SMAD3-207ENST00000558763 TAF1LQ8IZX4 1826 aa16.09■□□□□ 0.17
SMAD3-207ENST00000558763 SALL3Q9BXA9 1300 aa16.09■□□□□ 0.17
SMAD3-207ENST00000558763 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
SMAD3-207ENST00000558763 GSPT1P15170 499 aaKnown RBP16.09■□□□□ 0.17
SMAD3-207ENST00000558763 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
SMAD3-207ENST00000558763 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
SMAD3-207ENST00000558763 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
SMAD3-207ENST00000558763 CRKLP46109 303 aaKnown RBP16.08■□□□□ 0.16
SMAD3-207ENST00000558763 MTX1Q13505 466 aa16.08■□□□□ 0.16
SMAD3-207ENST00000558763 TXNRD1Q16881 649 aa16.08■□□□□ 0.16
SMAD3-207ENST00000558763 PLSCR1O15162 318 aa16.07■□□□□ 0.16
SMAD3-207ENST00000558763 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
SMAD3-207ENST00000558763 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
SMAD3-207ENST00000558763 KAZALD1Q96I82 304 aa16.07■□□□□ 0.16
SMAD3-207ENST00000558763 MYH14Q7Z406 1995 aaKnown RBP16.07■□□□□ 0.16
SMAD3-207ENST00000558763 PROM2Q8N271 834 aa16.07■□□□□ 0.16
SMAD3-207ENST00000558763 METTL22Q9BUU2 404 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-207ENST00000558763 CCDC87Q9NVE4 849 aa16.07■□□□□ 0.16
SMAD3-207ENST00000558763 RREB1Q92766 1687 aa16.06■□□□□ 0.16
SMAD3-207ENST00000558763 RGPD3A6NKT7 1758 aaPredicted RBP16.06■□□□□ 0.16
SMAD3-207ENST00000558763 RGPD4Q7Z3J3 1758 aa16.06■□□□□ 0.16
SMAD3-207ENST00000558763 NEURL1BA8MQ27 555 aa16.06■□□□□ 0.16
SMAD3-207ENST00000558763 APBB1O00213 710 aa16.06■□□□□ 0.16
SMAD3-207ENST00000558763 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
SMAD3-207ENST00000558763 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
SMAD3-207ENST00000558763 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
SMAD3-207ENST00000558763 EN1Q05925 392 aaPredicted RBP16.06■□□□□ 0.16
SMAD3-207ENST00000558763 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
SMAD3-207ENST00000558763 GRM8O00222 908 aa16.05■□□□□ 0.16
SMAD3-207ENST00000558763 TTC22Q5TAA0 569 aa16.05■□□□□ 0.16
SMAD3-207ENST00000558763 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
SMAD3-207ENST00000558763 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
SMAD3-207ENST00000558763 DEFB132Q7Z7B7 95 aa16.04■□□□□ 0.16
SMAD3-207ENST00000558763 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
SMAD3-207ENST00000558763 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
SMAD3-207ENST00000558763 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
SMAD3-207ENST00000558763 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
SMAD3-207ENST00000558763 OSBPL3Q9H4L5 887 aa16.04■□□□□ 0.16
SMAD3-207ENST00000558763 C9orf78Q9NZ63 289 aaPredicted RBP16.04■□□□□ 0.16
SMAD3-207ENST00000558763 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
SMAD3-207ENST00000558763 BAG6P46379 1132 aa16.03■□□□□ 0.16
SMAD3-207ENST00000558763 GCKRQ14397 625 aa16.03■□□□□ 0.16
SMAD3-207ENST00000558763 ARXQ96QS3 562 aa16.03■□□□□ 0.16
SMAD3-207ENST00000558763 MYD88Q99836 296 aa16.03■□□□□ 0.16
SMAD3-207ENST00000558763 LRRCC1Q9C099 1032 aa16.03■□□□□ 0.16
SMAD3-207ENST00000558763 GNPATO15228 680 aa16.02■□□□□ 0.16
SMAD3-207ENST00000558763 IL6STP40189 918 aaPredicted RBP16.02■□□□□ 0.16
SMAD3-207ENST00000558763 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.16
SMAD3-207ENST00000558763 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
SMAD3-207ENST00000558763 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
SMAD3-207ENST00000558763 AK7Q96M32 723 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms