RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 HDAC5Q9UQL6 1122 aa13.24□□□□□ -0.29
CSPG4P5-201ENST00000558731 TBC1D2Q9BYX2 928 aa13.24□□□□□ -0.29
CSPG4P5-201ENST00000558731 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
CSPG4P5-201ENST00000558731 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 GCKRQ14397 625 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 METTL22Q9BUU2 404 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 STARD3NLO95772 234 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 KIF6Q6ZMV9 814 aa13.23□□□□□ -0.29
CSPG4P5-201ENST00000558731 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
CSPG4P5-201ENST00000558731 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
CSPG4P5-201ENST00000558731 HSP90AB4PQ58FF6 505 aa13.22□□□□□ -0.29
CSPG4P5-201ENST00000558731 LMBR1LQ6UX01 489 aa13.22□□□□□ -0.29
CSPG4P5-201ENST00000558731 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
CSPG4P5-201ENST00000558731 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
CSPG4P5-201ENST00000558731 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.29
CSPG4P5-201ENST00000558731 KCNJ4P48050 445 aa13.21□□□□□ -0.3
CSPG4P5-201ENST00000558731 BOLA2Q9H3K6 86 aa13.21□□□□□ -0.3
CSPG4P5-201ENST00000558731 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 FAM89AQ96GI7 184 aa13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 NDUFB9Q9Y6M9 179 aa13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 PLBD2Q8NHP8 589 aa13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P5-201ENST00000558731 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
CSPG4P5-201ENST00000558731 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P5-201ENST00000558731 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
CSPG4P5-201ENST00000558731 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
CSPG4P5-201ENST00000558731 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
CSPG4P5-201ENST00000558731 REC8O95072 547 aa13.19□□□□□ -0.3
CSPG4P5-201ENST00000558731 ERC2O15083 957 aa13.18□□□□□ -0.3
CSPG4P5-201ENST00000558731 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
CSPG4P5-201ENST00000558731 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
CSPG4P5-201ENST00000558731 GSE1Q14687 1217 aa13.18□□□□□ -0.3
CSPG4P5-201ENST00000558731 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
CSPG4P5-201ENST00000558731 ZBTB1Q9Y2K1 713 aa13.18□□□□□ -0.3
CSPG4P5-201ENST00000558731 GORABQ5T7V8 394 aa13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 NPHP1O15259 732 aa13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 KCNQ2O43526 872 aa13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 FRAT2O75474 233 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 CNTROBQ8N137 903 aa13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
CSPG4P5-201ENST00000558731 NFKBIBQ15653 356 aa13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 SMIM5Q71RC9 77 aa13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 FOXD4L5Q5VV16 416 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 ERC1Q8IUD2 1116 aa13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 FOXD4L4Q8WXT5 416 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 POLA2Q14181 598 aa13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 EDC3Q96F86 508 aaKnown RBP13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
CSPG4P5-201ENST00000558731 MCCP23508 829 aa13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 TFCP2Q12800 502 aa13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 EAF2Q96CJ1 260 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P5-201ENST00000558731 CCDC57Q2TAC2 916 aa13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 NEK4P51957 841 aa13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 HLFQ16534 295 aa13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 DZIP3Q86Y13 1208 aaKnown RBP13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 USP21Q9UK80 565 aa13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 FAM208AQ9UK61 1670 aaKnown RBP13.14□□□□□ -0.31
CSPG4P5-201ENST00000558731 LMO7Q8WWI1 1683 aa13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 ROBO1Q9Y6N7 1651 aa13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 SASH1O94885 1247 aa13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 CD2BP2O95400 341 aaKnown RBP13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 TIMM10P62072 90 aa13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 CHMLP26374 656 aa13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 ESYT1Q9BSJ8 1104 aa13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P5-201ENST00000558731 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
CSPG4P5-201ENST00000558731 USP26Q9BXU7 913 aa13.12□□□□□ -0.31
CSPG4P5-201ENST00000558731 SNRKQ9NRH2 765 aa13.12□□□□□ -0.31
CSPG4P5-201ENST00000558731 DTNBO60941 627 aa13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 COL18A1P39060 1754 aa13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 ST18O60284 1047 aa13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 FOXD4L6Q3SYB3 417 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 FOXD4L3Q6VB84 417 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
CSPG4P5-201ENST00000558731 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms