RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 NEURL1BA8MQ27 555 aa17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 ALDH1L1O75891 902 aa17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 STARD3NLO95772 234 aa17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 PLBD2Q8NHP8 589 aa17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 C9orf78Q9NZ63 289 aaPredicted RBP17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 ZBTB1Q9Y2K1 713 aa17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 TJP1Q07157 1748 aa17.28■□□□□ 0.36
EFCAB11-212ENST00000556639 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
EFCAB11-212ENST00000556639 ITPK1Q13572 414 aa17.27■□□□□ 0.36
EFCAB11-212ENST00000556639 GCC1Q96CN9 775 aa17.27■□□□□ 0.36
EFCAB11-212ENST00000556639 EP400Q96L91 3159 aa17.27■□□□□ 0.36
EFCAB11-212ENST00000556639 PALLDQ8WX93 1383 aa17.27■□□□□ 0.36
EFCAB11-212ENST00000556639 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.35
EFCAB11-212ENST00000556639 ATP6V1AP38606 617 aa17.27■□□□□ 0.35
EFCAB11-212ENST00000556639 SIK1P57059 783 aa17.27■□□□□ 0.35
EFCAB11-212ENST00000556639 ATP8B2P98198 1209 aa17.27■□□□□ 0.35
EFCAB11-212ENST00000556639 CHD1LQ86WJ1 897 aa17.27■□□□□ 0.35
EFCAB11-212ENST00000556639 ARXQ96QS3 562 aa17.27■□□□□ 0.35
EFCAB11-212ENST00000556639 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
EFCAB11-212ENST00000556639 NEXNQ0ZGT2 675 aa17.26■□□□□ 0.35
EFCAB11-212ENST00000556639 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
EFCAB11-212ENST00000556639 GRM8O00222 908 aa17.25■□□□□ 0.35
EFCAB11-212ENST00000556639 GCKRQ14397 625 aa17.25■□□□□ 0.35
EFCAB11-212ENST00000556639 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
EFCAB11-212ENST00000556639 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
EFCAB11-212ENST00000556639 EXOC6BQ9Y2D4 811 aa17.25■□□□□ 0.35
EFCAB11-212ENST00000556639 C16orf71Q8IYS4 520 aaPredicted RBP17.24■□□□□ 0.35
EFCAB11-212ENST00000556639 NUP188Q5SRE5 1749 aa17.23■□□□□ 0.35
EFCAB11-212ENST00000556639 INTS5Q6P9B9 1019 aaKnown RBP17.23■□□□□ 0.35
EFCAB11-212ENST00000556639 BACH2Q9BYV9 841 aa17.23■□□□□ 0.35
EFCAB11-212ENST00000556639 AFDNP55196 1824 aaKnown RBP17.23■□□□□ 0.35
EFCAB11-212ENST00000556639 HMMRO75330 724 aa17.22■□□□□ 0.35
EFCAB11-212ENST00000556639 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
EFCAB11-212ENST00000556639 EPHA10Q5JZY3 1008 aa17.22■□□□□ 0.35
EFCAB11-212ENST00000556639 UTYO14607 1347 aa17.22■□□□□ 0.35
EFCAB11-212ENST00000556639 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
EFCAB11-212ENST00000556639 CRKLP46109 303 aaKnown RBP17.22■□□□□ 0.35
EFCAB11-212ENST00000556639 HLFQ16534 295 aa17.22■□□□□ 0.35
EFCAB11-212ENST00000556639 C8orf34Q49A92 452 aa17.21■□□□□ 0.35
EFCAB11-212ENST00000556639 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
EFCAB11-212ENST00000556639 SSH3Q8TE77 659 aa17.21■□□□□ 0.35
EFCAB11-212ENST00000556639 MYH14Q7Z406 1995 aaKnown RBP17.21■□□□□ 0.35
EFCAB11-212ENST00000556639 UBE3BQ7Z3V4 1068 aa17.21■□□□□ 0.35
EFCAB11-212ENST00000556639 BICC1Q9H694 974 aaKnown RBP17.21■□□□□ 0.35
EFCAB11-212ENST00000556639 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
EFCAB11-212ENST00000556639 A0A087WZG4 1122 aa17.2■□□□□ 0.34
EFCAB11-212ENST00000556639 POLA2Q14181 598 aa17.2■□□□□ 0.34
EFCAB11-212ENST00000556639 SMIM5Q71RC9 77 aa17.2■□□□□ 0.34
EFCAB11-212ENST00000556639 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
EFCAB11-212ENST00000556639 BTAF1O14981 1849 aa17.2■□□□□ 0.34
EFCAB11-212ENST00000556639 LINC00116Q8NCU8 138 aa17.19■□□□□ 0.34
EFCAB11-212ENST00000556639 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
EFCAB11-212ENST00000556639 BRWD3Q6RI45 1802 aa17.19■□□□□ 0.34
EFCAB11-212ENST00000556639 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
EFCAB11-212ENST00000556639 SBF2Q86WG5 1849 aa17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 NHSQ6T4R5 1651 aa17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 CASP7P55210 303 aa17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 EIF5P55010 431 aaKnown RBP17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
EFCAB11-212ENST00000556639 SURF6O75683 361 aaKnown RBP17.17■□□□□ 0.34
EFCAB11-212ENST00000556639 GPTP24298 496 aa17.17■□□□□ 0.34
EFCAB11-212ENST00000556639 DZIP3Q86Y13 1208 aaKnown RBP17.17■□□□□ 0.34
EFCAB11-212ENST00000556639 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
EFCAB11-212ENST00000556639 CWC25Q9NXE8 425 aaPredicted RBP17.17■□□□□ 0.34
EFCAB11-212ENST00000556639 MTX1Q13505 466 aa17.16■□□□□ 0.34
EFCAB11-212ENST00000556639 PLEKHM2Q8IWE5 1019 aa17.16■□□□□ 0.34
EFCAB11-212ENST00000556639 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
EFCAB11-212ENST00000556639 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
EFCAB11-212ENST00000556639 H7C1W4 665 aa17.15■□□□□ 0.34
EFCAB11-212ENST00000556639 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-212ENST00000556639 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
EFCAB11-212ENST00000556639 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
EFCAB11-212ENST00000556639 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
EFCAB11-212ENST00000556639 COL5A3P25940 1745 aaPredicted RBP17.15■□□□□ 0.34
EFCAB11-212ENST00000556639 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
EFCAB11-212ENST00000556639 SEC24BO95487 1268 aa17.14■□□□□ 0.33
EFCAB11-212ENST00000556639 RBM6P78332 1123 aaKnown RBP17.14■□□□□ 0.33
EFCAB11-212ENST00000556639 ZNF772Q68DY9 489 aaPredicted RBP17.14■□□□□ 0.33
EFCAB11-212ENST00000556639 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
EFCAB11-212ENST00000556639 ZBTB47Q9UFB7 747 aaPredicted RBP17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 TSHZ3Q63HK5 1081 aa17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 FAM89AQ96GI7 184 aa17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 NUP98P52948 1817 aa17.13■□□□□ 0.33
EFCAB11-212ENST00000556639 CICQ96RK0 1608 aaPredicted RBP17.12■□□□□ 0.33
EFCAB11-212ENST00000556639 RREB1Q92766 1687 aa17.12■□□□□ 0.33
EFCAB11-212ENST00000556639 TRIM37O94972 964 aa17.12■□□□□ 0.33
EFCAB11-212ENST00000556639 FOXO4P98177 505 aa17.12■□□□□ 0.33
EFCAB11-212ENST00000556639 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
EFCAB11-212ENST00000556639 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
EFCAB11-212ENST00000556639 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms