RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	ZBTB3	Q9H5J0	574 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	ZBTB1	Q9Y2K1	713 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	PALLD	Q8WX93	1383 aa		18.2	■□□□□ 0.5
PDE1B-206	ENST00000550285	LOC102724428	A0A0B4J2F2	783 aa		18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	NEURL1B	A8MQ27	555 aa		18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	ATP6V1A	P38606	617 aa		18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	KCNQ4	P56696	695 aa		18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	SIK1	P57059	783 aa		18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	JARID2	Q92833	1246 aa	Predicted RBP	18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	DCTPP1	Q9H773	170 aa		18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.19	■□□□□ 0.5
PDE1B-206	ENST00000550285	NUCB1	Q02818	461 aa		18.18	■□□□□ 0.5
PDE1B-206	ENST00000550285	ANKRD45	Q5TZF3	282 aa		18.18	■□□□□ 0.5
PDE1B-206	ENST00000550285	LNPK	Q9C0E8	428 aa		18.18	■□□□□ 0.5
PDE1B-206	ENST00000550285	ATP8B2	P98198	1209 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	NEXN	Q0ZGT2	675 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	GCC1	Q96CN9	775 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	ARX	Q96QS3	562 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	NUP188	Q5SRE5	1749 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	APBB1	O00213	710 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	GRM8	O00222	908 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	GCKR	Q14397	625 aa		18.17	■□□□□ 0.5
PDE1B-206	ENST00000550285	CHD1L	Q86WJ1	897 aa		18.16	■□□□□ 0.5
PDE1B-206	ENST00000550285	AFDN	P55196	1824 aa	Known RBP	18.16	■□□□□ 0.5
PDE1B-206	ENST00000550285	KAZALD1	Q96I82	304 aa		18.15	■□□□□ 0.5
PDE1B-206	ENST00000550285	BTAF1	O14981	1849 aa		18.15	■□□□□ 0.5
PDE1B-206	ENST00000550285	INTS5	Q6P9B9	1019 aa	Known RBP	18.15	■□□□□ 0.5
PDE1B-206	ENST00000550285	PPP1R42	Q7Z4L9	355 aa		18.15	■□□□□ 0.5
PDE1B-206	ENST00000550285	SUCLG2	Q96I99	432 aa		18.15	■□□□□ 0.5
PDE1B-206	ENST00000550285	BRWD3	Q6RI45	1802 aa		18.15	■□□□□ 0.5
PDE1B-206	ENST00000550285	SBF2	Q86WG5	1849 aa		18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	SMARCC1	Q92922	1105 aa	Predicted RBP	18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	ANP32E	Q9BTT0	268 aa		18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	MYH14	Q7Z406	1995 aa	Known RBP	18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	NHS	Q6T4R5	1651 aa		18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	CRKL	P46109	303 aa	Known RBP	18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	EXOC6B	Q9Y2D4	811 aa		18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	UTY	O14607	1347 aa		18.14	■□□□□ 0.49
PDE1B-206	ENST00000550285	SMARCA5	O60264	1052 aa	Predicted RBP	18.13	■□□□□ 0.49
PDE1B-206	ENST00000550285	HMMR	O75330	724 aa		18.13	■□□□□ 0.49
PDE1B-206	ENST00000550285	HLF	Q16534	295 aa		18.13	■□□□□ 0.49
PDE1B-206	ENST00000550285	TBC1D2B	Q9UPU7	963 aa		18.13	■□□□□ 0.49
PDE1B-206	ENST00000550285	RTL5	Q5HYW3	569 aa	Predicted RBP	18.12	■□□□□ 0.49
PDE1B-206	ENST00000550285	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.12	■□□□□ 0.49
PDE1B-206	ENST00000550285	CCDC87	Q9NVE4	849 aa		18.12	■□□□□ 0.49
PDE1B-206	ENST00000550285	SRGAP3	O43295	1099 aa		18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	EPHA10	Q5JZY3	1008 aa		18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	LINC00116	Q8NCU8	138 aa		18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	SSH3	Q8TE77	659 aa		18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	BICC1	Q9H694	974 aa	Known RBP	18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	RBM19	Q9Y4C8	960 aa	Known RBP	18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285		A0A087WZG4	1122 aa		18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	KIF6	Q6ZMV9	814 aa		18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	UBE3B	Q7Z3V4	1068 aa		18.11	■□□□□ 0.49
PDE1B-206	ENST00000550285	IL6ST	P40189	918 aa	Predicted RBP	18.1	■□□□□ 0.49
PDE1B-206	ENST00000550285	SMIM5	Q71RC9	77 aa		18.1	■□□□□ 0.49
PDE1B-206	ENST00000550285	MAP3K15	Q6ZN16	1313 aa		18.1	■□□□□ 0.49
PDE1B-206	ENST00000550285	POLA2	Q14181	598 aa		18.1	■□□□□ 0.49
PDE1B-206	ENST00000550285	ZNF772	Q68DY9	489 aa	Predicted RBP	18.1	■□□□□ 0.49
PDE1B-206	ENST00000550285	KRT27	Q7Z3Y8	459 aa		18.1	■□□□□ 0.49
PDE1B-206	ENST00000550285	EIF5	P55010	431 aa	Known RBP	18.09	■□□□□ 0.49
PDE1B-206	ENST00000550285	TCIRG1	Q13488	830 aa		18.09	■□□□□ 0.49
PDE1B-206	ENST00000550285	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.09	■□□□□ 0.49
PDE1B-206	ENST00000550285	BACH2	Q9BYV9	841 aa		18.09	■□□□□ 0.49
PDE1B-206	ENST00000550285	COL5A3	P25940	1745 aa	Predicted RBP	18.09	■□□□□ 0.49
PDE1B-206	ENST00000550285	CASP7	P55210	303 aa		18.08	■□□□□ 0.49
PDE1B-206	ENST00000550285	RBM6	P78332	1123 aa	Known RBP	18.08	■□□□□ 0.49
PDE1B-206	ENST00000550285	DZIP3	Q86Y13	1208 aa	Known RBP	18.08	■□□□□ 0.49
PDE1B-206	ENST00000550285	ISCA1	Q9BUE6	129 aa		18.08	■□□□□ 0.48
PDE1B-206	ENST00000550285	CWC25	Q9NXE8	425 aa	Predicted RBP	18.08	■□□□□ 0.48
PDE1B-206	ENST00000550285	CIC	Q96RK0	1608 aa	Predicted RBP	18.08	■□□□□ 0.48
PDE1B-206	ENST00000550285	C8orf34	Q49A92	452 aa		18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	RGS17	Q9UGC6	210 aa	Predicted RBP	18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285		H7C1W4	665 aa		18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	GPT	P24298	496 aa		18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	MTX1	Q13505	466 aa		18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	FBXO41	Q8TF61	875 aa		18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	PA2G4	Q9UQ80	394 aa	Known RBP	18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	RREB1	Q92766	1687 aa		18.07	■□□□□ 0.48
PDE1B-206	ENST00000550285	SURF6	O75683	361 aa	Known RBP	18.06	■□□□□ 0.48
PDE1B-206	ENST00000550285	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.06	■□□□□ 0.48
PDE1B-206	ENST00000550285	CCDC191	Q8NCU4	936 aa		18.06	■□□□□ 0.48
PDE1B-206	ENST00000550285	NUP98	P52948	1817 aa		18.06	■□□□□ 0.48
PDE1B-206	ENST00000550285	TRIM37	O94972	964 aa		18.05	■□□□□ 0.48
PDE1B-206	ENST00000550285	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.05	■□□□□ 0.48
PDE1B-206	ENST00000550285	CCNL1	Q9UK58	526 aa	Predicted RBP	18.05	■□□□□ 0.48
PDE1B-206	ENST00000550285	ZNF831	Q5JPB2	1677 aa		18.05	■□□□□ 0.48
PDE1B-206	ENST00000550285	FAM161A	Q3B820	660 aa		18.04	■□□□□ 0.48
PDE1B-206	ENST00000550285	NPM2	Q86SE8	214 aa	Known RBP	18.04	■□□□□ 0.48
PDE1B-206	ENST00000550285	SYNE4	Q8N205	404 aa		18.04	■□□□□ 0.48
PDE1B-206	ENST00000550285	FAM196A	Q6ZSG2	479 aa		18.04	■□□□□ 0.48
PDE1B-206	ENST00000550285	PLEKHM2	Q8IWE5	1019 aa		18.04	■□□□□ 0.48
PDE1B-206	ENST00000550285	KLHDC4	Q8TBB5	520 aa		18.04	■□□□□ 0.48
PDE1B-206	ENST00000550285	HDAC5	Q9UQL6	1122 aa		18.03	■□□□□ 0.48
PDE1B-206	ENST00000550285	LY75	O60449	1722 aa		18.03	■□□□□ 0.48
PDE1B-206	ENST00000550285	FOXO4	P98177	505 aa		18.03	■□□□□ 0.48
PDE1B-206	ENST00000550285	AMIGO3	Q86WK7	504 aa		18.03	■□□□□ 0.48
PDE1B-206	ENST00000550285	FAM89A	Q96GI7	184 aa		18.03	■□□□□ 0.48
PDE1B-206	ENST00000550285	IL1RAPL2	Q9NP60	686 aa		18.03	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms