RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PTPRCP08575 1304 aa7.97□□□□□ -1.13
SNHG1-225ENST00000545920 TECPR2O15040 1411 aa7.96□□□□□ -1.13
SNHG1-225ENST00000545920 SOWAHBA6NEL2 793 aa7.96□□□□□ -1.14
SNHG1-225ENST00000545920 RAD21O60216 631 aa7.96□□□□□ -1.14
SNHG1-225ENST00000545920 HSP90AA1P07900 732 aaKnown RBP7.96□□□□□ -1.14
SNHG1-225ENST00000545920 PRKAR2BP31323 418 aa7.96□□□□□ -1.14
SNHG1-225ENST00000545920 MCM2P49736 904 aa7.96□□□□□ -1.14
SNHG1-225ENST00000545920 TNPO1Q92973 898 aaKnown RBP7.96□□□□□ -1.14
SNHG1-225ENST00000545920 TRIM44Q96DX7 344 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-225ENST00000545920 DCTPP1Q9H773 170 aa7.96□□□□□ -1.14
SNHG1-225ENST00000545920 ESPNB1AK53 854 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 SOCS7O14512 581 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 RRP9O43818 475 aaKnown RBP7.95□□□□□ -1.14
SNHG1-225ENST00000545920 HMMRO75330 724 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 REC8O95072 547 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 TPM2P07951 284 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 COL9A1P20849 921 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 IL13P35225 146 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 RFC5P40937 340 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 BCAMP50895 628 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 PROX2Q3B8N5 592 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 ANKRD45Q5TZF3 282 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 Q6ZNB5 142 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 TBC1D9Q6ZT07 1266 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 RBM46Q8TBY0 533 aaKnown RBP7.95□□□□□ -1.14
SNHG1-225ENST00000545920 PPP1R9BQ96SB3 815 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 LNPKQ9C0E8 428 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 ARHGEF10O15013 1369 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 RICTORQ6R327 1708 aa7.95□□□□□ -1.14
SNHG1-225ENST00000545920 SPATA31D1Q6ZQQ2 1576 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.94□□□□□ -1.14
SNHG1-225ENST00000545920 PDIA4P13667 645 aaKnown RBP7.94□□□□□ -1.14
SNHG1-225ENST00000545920 MCM5P33992 734 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 ZNF445P59923 1031 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 TWISTNBQ3B726 338 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-225ENST00000545920 FBXO31Q5XUX0 539 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-225ENST00000545920 ANKRD44Q8N8A2 993 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 KIF2CQ99661 725 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 OSBPL3Q9H4L5 887 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 RRAGDQ9NQL2 400 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-225ENST00000545920 CABP1Q9NZU7 370 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 RIMS2Q9UQ26 1411 aa7.94□□□□□ -1.14
SNHG1-225ENST00000545920 TTC22Q5TAA0 569 aa7.93□□□□□ -1.14
SNHG1-225ENST00000545920 IL17RAQ96F46 866 aa7.93□□□□□ -1.14
SNHG1-225ENST00000545920 COG3Q96JB2 828 aa7.93□□□□□ -1.14
SNHG1-225ENST00000545920 EYA1Q99502 592 aa7.93□□□□□ -1.14
SNHG1-225ENST00000545920 CHMP4AQ9BY43 222 aa7.93□□□□□ -1.14
SNHG1-225ENST00000545920 SNRKQ9NRH2 765 aa7.93□□□□□ -1.14
SNHG1-225ENST00000545920 WASLO00401 505 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-225ENST00000545920 SPTLC1O15269 473 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 CYP2E1P05181 493 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-225ENST00000545920 GJA5P36382 358 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 ANAPC15P60006 121 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 KCNC4Q03721 635 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 PLEKHM2Q8IWE5 1019 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 ZFRQ96KR1 1074 aaKnown RBP7.92□□□□□ -1.14
SNHG1-225ENST00000545920 MBIPQ9NS73 344 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 BABAM1Q9NWV8 329 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 STK26Q9P289 416 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 FAM198AQ9UFP1 575 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 LIMD1Q9UGP4 676 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 TTC21BQ7Z4L5 1316 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 RTL1A6NKG5 1358 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 SSH2Q76I76 1423 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 A2ML1A8K2U0 1454 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 NRKQ7Z2Y5 1582 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 KNDC1Q76NI1 1749 aa7.92□□□□□ -1.14
SNHG1-225ENST00000545920 CHL1O00533 1208 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 HTATSF1O43719 755 aaKnown RBP7.91□□□□□ -1.14
SNHG1-225ENST00000545920 BAG4O95429 457 aaKnown RBP7.91□□□□□ -1.14
SNHG1-225ENST00000545920 MBD3O95983 291 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 CD46P15529 392 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 CCT4P50991 539 aaKnown RBP7.91□□□□□ -1.14
SNHG1-225ENST00000545920 LAPTM4AQ15012 233 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 ZSCAN30Q86W11 494 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 USP26Q9BXU7 913 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 KIAA1468Q9P260 1216 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 AOX1Q06278 1338 aa7.91□□□□□ -1.14
SNHG1-225ENST00000545920 CPS1P31327 1500 aa7.9□□□□□ -1.14
SNHG1-225ENST00000545920 RCCD1A6NED2 376 aa7.9□□□□□ -1.14
SNHG1-225ENST00000545920 MCCP23508 829 aa7.9□□□□□ -1.14
SNHG1-225ENST00000545920 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-225ENST00000545920 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-225ENST00000545920 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.14
SNHG1-225ENST00000545920 INTS4Q96HW7 963 aaKnown RBP7.9□□□□□ -1.14
SNHG1-225ENST00000545920 MAP7D2Q96T17 732 aa7.9□□□□□ -1.14
SNHG1-225ENST00000545920 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
SNHG1-225ENST00000545920 WBP1LQ9NX94 342 aa7.9□□□□□ -1.14
SNHG1-225ENST00000545920 DDX49Q9Y6V7 483 aaKnown RBP7.9□□□□□ -1.14
SNHG1-225ENST00000545920 ATP10DQ9P241 1426 aa7.89□□□□□ -1.15
SNHG1-225ENST00000545920 C3orf80F5H4A9 247 aa7.89□□□□□ -1.15
SNHG1-225ENST00000545920 ERC2O15083 957 aa7.89□□□□□ -1.15
SNHG1-225ENST00000545920 RAPGEF3O95398 923 aa7.89□□□□□ -1.15
SNHG1-225ENST00000545920 CSPP1Q1MSJ5 1256 aa7.89□□□□□ -1.15
SNHG1-225ENST00000545920 MTERF4Q7Z6M4 381 aaKnown RBP7.89□□□□□ -1.15
SNHG1-225ENST00000545920 MTMR14Q8NCE2 650 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms