RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 NBPF7P0C2Y1 421 aaPredicted RBP13.76□□□□□ -0.21
SCG3-202ENST00000542355 BACH2Q9BYV9 841 aa13.76□□□□□ -0.21
SCG3-202ENST00000542355 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
SCG3-202ENST00000542355 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
SCG3-202ENST00000542355 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
SCG3-202ENST00000542355 DNAJC10Q8IXB1 793 aa13.75□□□□□ -0.21
SCG3-202ENST00000542355 PROM2Q8N271 834 aa13.75□□□□□ -0.21
SCG3-202ENST00000542355 LINS1Q8NG48 757 aa13.75□□□□□ -0.21
SCG3-202ENST00000542355 HMMRO75330 724 aa13.75□□□□□ -0.21
SCG3-202ENST00000542355 TEX13AQ9BXU3 409 aaPredicted RBP13.75□□□□□ -0.21
SCG3-202ENST00000542355 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
SCG3-202ENST00000542355 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
SCG3-202ENST00000542355 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
SCG3-202ENST00000542355 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 FAM161AQ3B820 660 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 MYD88Q99836 296 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 METTL22Q9BUU2 404 aaPredicted RBP13.73□□□□□ -0.21
SCG3-202ENST00000542355 BCL11AQ9H165 835 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 GLI3P10071 1580 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 AFF2P51816 1311 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 STARD3NLO95772 234 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
SCG3-202ENST00000542355 APBB1O00213 710 aa13.72□□□□□ -0.21
SCG3-202ENST00000542355 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
SCG3-202ENST00000542355 PLBD2Q8NHP8 589 aa13.72□□□□□ -0.21
SCG3-202ENST00000542355 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
SCG3-202ENST00000542355 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
SCG3-202ENST00000542355 KCNQ2O43526 872 aa13.72□□□□□ -0.21
SCG3-202ENST00000542355 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
SCG3-202ENST00000542355 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.21
SCG3-202ENST00000542355 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
SCG3-202ENST00000542355 GRM8O00222 908 aa13.71□□□□□ -0.21
SCG3-202ENST00000542355 C8orf34Q49A92 452 aa13.71□□□□□ -0.21
SCG3-202ENST00000542355 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
SCG3-202ENST00000542355 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
SCG3-202ENST00000542355 ATP5J2-PTCD1G3V325 749 aa13.71□□□□□ -0.22
SCG3-202ENST00000542355 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.22
SCG3-202ENST00000542355 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
SCG3-202ENST00000542355 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
SCG3-202ENST00000542355 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
SCG3-202ENST00000542355 CYP19A1P11511 503 aaPredicted RBP13.69□□□□□ -0.22
SCG3-202ENST00000542355 GCKRQ14397 625 aa13.69□□□□□ -0.22
SCG3-202ENST00000542355 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
SCG3-202ENST00000542355 EXOC6BQ9Y2D4 811 aa13.69□□□□□ -0.22
SCG3-202ENST00000542355 SSH3Q8TE77 659 aa13.69□□□□□ -0.22
SCG3-202ENST00000542355 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
SCG3-202ENST00000542355 HDAC5Q9UQL6 1122 aa13.69□□□□□ -0.22
SCG3-202ENST00000542355 ITGB4P16144 1822 aa13.68□□□□□ -0.22
SCG3-202ENST00000542355 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
SCG3-202ENST00000542355 C16orf71Q8IYS4 520 aaPredicted RBP13.68□□□□□ -0.22
SCG3-202ENST00000542355 UTYO14607 1347 aa13.68□□□□□ -0.22
SCG3-202ENST00000542355 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
SCG3-202ENST00000542355 FAM182BQ5T319 152 aa13.68□□□□□ -0.22
SCG3-202ENST00000542355 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
SCG3-202ENST00000542355 SUCLG2Q96I99 432 aa13.68□□□□□ -0.22
SCG3-202ENST00000542355 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
SCG3-202ENST00000542355 SIK1P57059 783 aa13.67□□□□□ -0.22
SCG3-202ENST00000542355 POLA2Q14181 598 aa13.67□□□□□ -0.22
SCG3-202ENST00000542355 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
SCG3-202ENST00000542355 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
SCG3-202ENST00000542355 KAZALD1Q96I82 304 aa13.66□□□□□ -0.22
SCG3-202ENST00000542355 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
SCG3-202ENST00000542355 ZBTB1Q9Y2K1 713 aa13.66□□□□□ -0.22
SCG3-202ENST00000542355 DOT1LQ8TEK3 1739 aa13.66□□□□□ -0.22
SCG3-202ENST00000542355 A0A087WZG4 1122 aa13.66□□□□□ -0.22
SCG3-202ENST00000542355 SURF6O75683 361 aaKnown RBP13.66□□□□□ -0.22
SCG3-202ENST00000542355 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
SCG3-202ENST00000542355 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
SCG3-202ENST00000542355 BICC1Q9H694 974 aaKnown RBP13.65□□□□□ -0.22
SCG3-202ENST00000542355 PALLDQ8WX93 1383 aa13.65□□□□□ -0.22
SCG3-202ENST00000542355 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
SCG3-202ENST00000542355 MTX1Q13505 466 aa13.65□□□□□ -0.22
SCG3-202ENST00000542355 KIF6Q6ZMV9 814 aa13.65□□□□□ -0.22
SCG3-202ENST00000542355 PTF1AQ7RTS3 328 aa13.65□□□□□ -0.22
SCG3-202ENST00000542355 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
SCG3-202ENST00000542355 OTUD7AQ8TE49 926 aaPredicted RBP13.65□□□□□ -0.22
SCG3-202ENST00000542355 LRRCC1Q9C099 1032 aa13.65□□□□□ -0.22
SCG3-202ENST00000542355 UBE3BQ7Z3V4 1068 aa13.64□□□□□ -0.23
SCG3-202ENST00000542355 SEPT12Q8IYM1 358 aa13.64□□□□□ -0.23
SCG3-202ENST00000542355 IBTKQ9P2D0 1353 aaPredicted RBP13.64□□□□□ -0.23
SCG3-202ENST00000542355 ATRNO75882 1429 aa13.64□□□□□ -0.23
SCG3-202ENST00000542355 ITPK1Q13572 414 aa13.64□□□□□ -0.23
SCG3-202ENST00000542355 CWC25Q9NXE8 425 aaPredicted RBP13.64□□□□□ -0.23
SCG3-202ENST00000542355 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
SCG3-202ENST00000542355 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
SCG3-202ENST00000542355 EPHA10Q5JZY3 1008 aa13.63□□□□□ -0.23
SCG3-202ENST00000542355 SEC24BO95487 1268 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
SCG3-202ENST00000542355 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
SCG3-202ENST00000542355 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
SCG3-202ENST00000542355 CCDC191Q8NCU4 936 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
SCG3-202ENST00000542355 H7C1W4 665 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 RAB11FIP3O75154 756 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 HLFQ16534 295 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 BMP2KLQ5H9B9 411 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
SCG3-202ENST00000542355 TBC1D2BQ9UPU7 963 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms