RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
GCFC2-211ENST00000541687 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
GCFC2-211ENST00000541687 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
GCFC2-211ENST00000541687 IDH1O75874 414 aaKnown RBP17.1■□□□□ 0.33
GCFC2-211ENST00000541687 ZNF396Q96N95 335 aaPredicted RBP17.1■□□□□ 0.33
GCFC2-211ENST00000541687 IFIT1P09914 478 aaKnown RBP17.1■□□□□ 0.33
GCFC2-211ENST00000541687 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
GCFC2-211ENST00000541687 ERICH2A1L162 156 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 HAND2P61296 217 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 ANKRD13DQ6ZTN6 518 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 NAT10Q9H0A0 1025 aaKnown RBP17.09■□□□□ 0.33
GCFC2-211ENST00000541687 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 KCNQ3O43525 872 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 SAFBQ15424 915 aaKnown RBP eCLIP17.09■□□□□ 0.33
GCFC2-211ENST00000541687 MAP3K4Q9Y6R4 1608 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 UBE2HP62256 183 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 NMIQ13287 307 aaPredicted RBP17.09■□□□□ 0.33
GCFC2-211ENST00000541687 PDILTQ8N807 584 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 IL17REQ8NFR9 667 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
GCFC2-211ENST00000541687 CFAP45Q9UL16 551 aa17.09■□□□□ 0.33
GCFC2-211ENST00000541687 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.33
GCFC2-211ENST00000541687 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.33
GCFC2-211ENST00000541687 FAM173BQ6P4H8 233 aa17.08■□□□□ 0.32
GCFC2-211ENST00000541687 BRF1Q92994 677 aa17.08■□□□□ 0.32
GCFC2-211ENST00000541687 KIF1BO60333 1816 aa17.08■□□□□ 0.32
GCFC2-211ENST00000541687 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
GCFC2-211ENST00000541687 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
GCFC2-211ENST00000541687 SCAND2PQ9GZW5 306 aaPredicted RBP17.07■□□□□ 0.32
GCFC2-211ENST00000541687 TET3O43151 1660 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 LMBRD1Q9NUN5 540 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 GCP02774 474 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 SYT1P21579 422 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 DHX16O60231 1041 aaKnown RBP17.07■□□□□ 0.32
GCFC2-211ENST00000541687 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
GCFC2-211ENST00000541687 EFCAB6Q5THR3 1501 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 E9PCH4 1651 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 ZNF853P0CG23 659 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 F13A1P00488 732 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 GPTP24298 496 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 UNC5CLQ8IV45 518 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 CCDC82Q8N4S0 544 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
GCFC2-211ENST00000541687 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
GCFC2-211ENST00000541687 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
GCFC2-211ENST00000541687 BICC1Q9H694 974 aaKnown RBP17.05■□□□□ 0.32
GCFC2-211ENST00000541687 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
GCFC2-211ENST00000541687 LMBR1LQ6UX01 489 aa17.05■□□□□ 0.32
GCFC2-211ENST00000541687 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
GCFC2-211ENST00000541687 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
GCFC2-211ENST00000541687 TMEM63CQ9P1W3 806 aa17.05■□□□□ 0.32
GCFC2-211ENST00000541687 METTL24Q5JXM2 366 aa17.04■□□□□ 0.32
GCFC2-211ENST00000541687 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
GCFC2-211ENST00000541687 CHST3Q7LGC8 479 aa17.04■□□□□ 0.32
GCFC2-211ENST00000541687 U3KPZ7 1027 aaPredicted RBP17.04■□□□□ 0.32
GCFC2-211ENST00000541687 MLH3Q9UHC1 1453 aa17.04■□□□□ 0.32
GCFC2-211ENST00000541687 FAM177A1Q8N128 213 aaPredicted RBP17.04■□□□□ 0.32
GCFC2-211ENST00000541687 NUP133Q8WUM0 1156 aa17.04■□□□□ 0.32
GCFC2-211ENST00000541687 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
GCFC2-211ENST00000541687 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
GCFC2-211ENST00000541687 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
GCFC2-211ENST00000541687 IP6K1Q92551 441 aa17.03■□□□□ 0.32
GCFC2-211ENST00000541687 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
GCFC2-211ENST00000541687 SNX14Q9Y5W7 946 aa17.03■□□□□ 0.32
GCFC2-211ENST00000541687 ALDH1L1O75891 902 aa17.03■□□□□ 0.32
GCFC2-211ENST00000541687 CREB3L3Q68CJ9 461 aa17.03■□□□□ 0.32
GCFC2-211ENST00000541687 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
GCFC2-211ENST00000541687 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.03■□□□□ 0.32
GCFC2-211ENST00000541687 DACT1Q9NYF0 836 aa17.02■□□□□ 0.32
GCFC2-211ENST00000541687 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.32
GCFC2-211ENST00000541687 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.32
GCFC2-211ENST00000541687 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.32
GCFC2-211ENST00000541687 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
GCFC2-211ENST00000541687 C16orf45Q96MC5 204 aaPredicted RBP17.02■□□□□ 0.32
GCFC2-211ENST00000541687 BIN1O00499 593 aa17.02■□□□□ 0.31
GCFC2-211ENST00000541687 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.31
GCFC2-211ENST00000541687 SGSM2O43147 1006 aa17.02■□□□□ 0.31
GCFC2-211ENST00000541687 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.31
GCFC2-211ENST00000541687 SERPINC1P01008 464 aa17.02■□□□□ 0.31
GCFC2-211ENST00000541687 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.31
GCFC2-211ENST00000541687 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.31
GCFC2-211ENST00000541687 ZKSCAN5Q9Y2L8 839 aa17.02■□□□□ 0.31
GCFC2-211ENST00000541687 ZNF165P49910 485 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 ABCA6Q8N139 1617 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
GCFC2-211ENST00000541687 ISM2Q6H9L7 571 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 CCDC112Q8NEF3 446 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
GCFC2-211ENST00000541687 MPHOSPH8Q99549 860 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 NEO1Q92859 1461 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
GCFC2-211ENST00000541687 ABCC3O15438 1527 aa17.01■□□□□ 0.31
GCFC2-211ENST00000541687 TMEM2Q9UHN6 1383 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms