RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PIGBQ92521 554 aa11.92□□□□□ -0.5
PAAF1-209ENST00000540659 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
PAAF1-209ENST00000540659 LRRFIP2Q9Y608 721 aaKnown RBP11.92□□□□□ -0.5
PAAF1-209ENST00000540659 BAG6P46379 1132 aa11.91□□□□□ -0.5
PAAF1-209ENST00000540659 CWF19L2Q2TBE0 894 aaKnown RBP11.91□□□□□ -0.5
PAAF1-209ENST00000540659 ACSBG1Q96GR2 724 aa11.91□□□□□ -0.5
PAAF1-209ENST00000540659 MYD88Q99836 296 aa11.91□□□□□ -0.5
PAAF1-209ENST00000540659 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
PAAF1-209ENST00000540659 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
PAAF1-209ENST00000540659 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
PAAF1-209ENST00000540659 HMMRO75330 724 aa11.9□□□□□ -0.5
PAAF1-209ENST00000540659 TJP1Q07157 1748 aa11.9□□□□□ -0.5
PAAF1-209ENST00000540659 PTF1AQ7RTS3 328 aa11.9□□□□□ -0.5
PAAF1-209ENST00000540659 DCTPP1Q9H773 170 aa11.9□□□□□ -0.5
PAAF1-209ENST00000540659 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
PAAF1-209ENST00000540659 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-209ENST00000540659 APBA3O96018 575 aa11.89□□□□□ -0.51
PAAF1-209ENST00000540659 A1BGP04217 495 aa11.89□□□□□ -0.51
PAAF1-209ENST00000540659 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-209ENST00000540659 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
PAAF1-209ENST00000540659 EN1Q05925 392 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-209ENST00000540659 C9orf78Q9NZ63 289 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-209ENST00000540659 PNMA6EA0A0J9YXQ4 647 aa11.88□□□□□ -0.51
PAAF1-209ENST00000540659 ALDH1L1O75891 902 aa11.88□□□□□ -0.51
PAAF1-209ENST00000540659 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
PAAF1-209ENST00000540659 NEXNQ0ZGT2 675 aa11.88□□□□□ -0.51
PAAF1-209ENST00000540659 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
PAAF1-209ENST00000540659 DNAJC10Q8IXB1 793 aa11.88□□□□□ -0.51
PAAF1-209ENST00000540659 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
PAAF1-209ENST00000540659 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 KCNQ2O43526 872 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 EZH2Q15910 746 aaKnown RBP11.87□□□□□ -0.51
PAAF1-209ENST00000540659 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
PAAF1-209ENST00000540659 LRP10Q7Z4F1 713 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
PAAF1-209ENST00000540659 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
PAAF1-209ENST00000540659 HDAC5Q9UQL6 1122 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
PAAF1-209ENST00000540659 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
PAAF1-209ENST00000540659 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
PAAF1-209ENST00000540659 C16orf71Q8IYS4 520 aaPredicted RBP11.86□□□□□ -0.51
PAAF1-209ENST00000540659 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
PAAF1-209ENST00000540659 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
PAAF1-209ENST00000540659 NEURL1BA8MQ27 555 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 ATP5J2-PTCD1G3V325 749 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 IGKV5-2P06315 115 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
PAAF1-209ENST00000540659 PPP1R42Q7Z4L9 355 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 ARXQ96QS3 562 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
PAAF1-209ENST00000540659 LY75O60449 1722 aa11.84□□□□□ -0.51
PAAF1-209ENST00000540659 GRM8O00222 908 aa11.84□□□□□ -0.51
PAAF1-209ENST00000540659 SRGAP3O43295 1099 aa11.84□□□□□ -0.51
PAAF1-209ENST00000540659 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
PAAF1-209ENST00000540659 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
PAAF1-209ENST00000540659 SEC24BO95487 1268 aa11.83□□□□□ -0.52
PAAF1-209ENST00000540659 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
PAAF1-209ENST00000540659 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
PAAF1-209ENST00000540659 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
PAAF1-209ENST00000540659 ANKRD36CQ5JPF3 1778 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 PLSCR1O15162 318 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 SURF6O75683 361 aaKnown RBP11.82□□□□□ -0.52
PAAF1-209ENST00000540659 STARD3NLO95772 234 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 POLA2Q14181 598 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 GCKRQ14397 625 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 KIF6Q6ZMV9 814 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
PAAF1-209ENST00000540659 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
PAAF1-209ENST00000540659 IBTKQ9P2D0 1353 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-209ENST00000540659 SMARCC1Q92922 1105 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-209ENST00000540659 UTYO14607 1347 aa11.81□□□□□ -0.52
PAAF1-209ENST00000540659 COL5A3P25940 1745 aaPredicted RBP11.8□□□□□ -0.52
PAAF1-209ENST00000540659 A0A087WZG4 1122 aa11.8□□□□□ -0.52
PAAF1-209ENST00000540659 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
PAAF1-209ENST00000540659 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
PAAF1-209ENST00000540659 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
PAAF1-209ENST00000540659 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
PAAF1-209ENST00000540659 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
PAAF1-209ENST00000540659 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
PAAF1-209ENST00000540659 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 NUP98P52948 1817 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 GSPT1P15170 499 aaKnown RBP11.79□□□□□ -0.52
PAAF1-209ENST00000540659 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
PAAF1-209ENST00000540659 BMP2KLQ5H9B9 411 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 UBE3BQ7Z3V4 1068 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 PROM2Q8N271 834 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 KAZALD1Q96I82 304 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 CWC25Q9NXE8 425 aaPredicted RBP11.79□□□□□ -0.52
PAAF1-209ENST00000540659 PA2G4Q9UQ80 394 aaKnown RBP11.79□□□□□ -0.52
PAAF1-209ENST00000540659 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 SRCAPQ6ZRS2 3230 aa11.79□□□□□ -0.52
PAAF1-209ENST00000540659 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms